Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq108213 167 8e-37 seq56696 154 5e-33 seq37734 145 3e-30 seq108967 123 8e-24 seq57003 86.0 2e-12 >seq108213 Length=2622 Score = 167 bits (184), Expect = 8e-37 Identities = 268/380 (71%), Gaps = 14/380 (4%) Strand=Plus/Minus Query 40659 TCCAGCACGCGGGCTGCGTCCTTCATCGCG---TTGCGCGCCTTGATCCGTCCGTACGTC 40715 || ||||||||| | |||| |||||| ||| |||| ||| ||| | || Sbjct 1850 TCGAGCACGCGGCCGACGTCGCGGATCGCGCCCTTGGCCGCC---ATCGTACCGAAGGTG 1794 Query 40716 GCGATCTGCGCGACCTTGTCGGCCCCGTACT--TCCGGGTGACGTACTGGATCACCTCGC 40773 |||||||||| |||| ||| |||||| ||| | |||| ||||||||| | Sbjct 1793 GCGATCTGCGAGACCGCGTCCTTGCCGTACAAATCCT--TCACGTGCTGGATCACGCGGT 1736 Query 40774 CACGACG--CCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTT 40831 | || | || | || |||||||||||||| |||||||| |||||||| ||||| || Sbjct 1735 CGCGCCCTTCCTGGCA--GAAGTCGATGTCGAAGTCGGGCATCGACACGCGTTCGGGATT 1678 Query 40832 CAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGAC 40891 ||||| |||||||| | || || || ||||| ||||||||||||||| || Sbjct 1677 GAGGAAGCGCTCGAACAGCAGATTGTACTGGAGCGGATCGAGGTCGGTGATCAGCAGCGA 1618 Query 40892 GTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTC 40951 |||||| |||||||||||||| | || || || || || || ||| || || ||||| Sbjct 1617 GTAGGCCACCAGCGAACCGGCGCCCGAACCACGGCCCGGCCCCACCGGCACACCATTCTC 1558 Query 40952 CTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGAT 41011 ||| ||||| |||||| || || |||| |||||||| ||||| ||| | Sbjct 1557 CTTGGCCCACTTGATGAATTCGGCCACGATCAGGAAGTAGCCGGGGAATTTCATATTACA 1498 Query 41012 GATCATGTCGATCTCGTACT 41031 |||| ||||| ||||| ||| Sbjct 1497 GATCGTGTCGGTCTCGAACT 1478 >seq56696 Length=1533 Score = 154 bits (170), Expect = 5e-33 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 40808 GGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGG 40867 |||||||||||| ||||| |||||||||||||| ||||| | | | || || |||||| Sbjct 1533 GGGCATGGACACCCGCTCCGGGTTCAGGAACCGTTCGAACAGCAACTTGTACTGCAGCGG 1474 Query 40868 GTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCC 40927 ||| |||||||| ||| || | || || |||||||||||||| ||||||| || || Sbjct 1473 GTCCAGGTCGGTAATCTTCAGCGCATAAGCCACCAGCGAACCGGCACCAGAGCCCCGGCC 1414 Query 40928 AGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAA 40987 || || ||| | ||| || ||| |||||| |||||||||| | |||| | ||| Sbjct 1413 TGGCCCCACCGGGCAGCCATTGAGCTTGGCCCAGTTGATGAAGTCCCCCACGATCAAGAA 1354 Query 40988 GTACGACGGGAAGCCCATCTGGATGATCATGTCGATCTCGTACTGGAGCTGCT 41040 ||| |||||||||||||| | ||| || ||||||| | | ||| ||| Sbjct 1353 GTAGCCCGGGAAGCCCATCTTCAGGATGGTGGTGATCTCGAATTCCAGCCGCT 1301 >seq37734 Length=186 Score = 145 bits (160), Expect = 3e-30 Identities = 142/183 (78%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 40808 GGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGG 40867 |||||||||||| ||||| ||||||||||| ||||| || | || || |||||| Sbjct 1 GGGCATGGACACCCGCTCCGGGTTCAGGAAGCGCTCAAACAGCAGGTTGTAGCGCAGCGG 60 Query 40868 GTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCC 40927 ||| ||||| |||||| || | |||||||||||||| ||||| | ||||| || || Sbjct 61 GTCCAGGTCCGTGATCAGCAGCGCATAGGCGACCAGCGAGCCGGCACCGGAGCCCCGGCC 120 Query 40928 AGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAA 40987 |||||||| | |||||| |||| ||||||||||||||||||| |||| ||||| Sbjct 121 CGGGCCGACAGGGCAGCCGTTTGCCTTGGCCCAGCGGATGAAGTCCGACACGATCAGGAA 180 Query 40988 GTA 40990 ||| Sbjct 181 GTA 183 >seq108967 Length=4619 Score = 123 bits (136), Expect = 8e-24 Identities = 236/344 (69%), Gaps = 8/344 (2%) Strand=Plus/Plus Query 40651 AGGGCTTGTCCAGCACGCGGGCTGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGT 40710 ||||| | | || |||||| | |||| || | || |||||||| || | |||| Sbjct 4279 AGGGCATCTGCAAAACGCGGCCGACGTCGCGCAGCACGGCGCGCGCCTGGAGCGTTCCGA 4338 Query 40711 ACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTT--CCGGGTGACGTACTGGATCAC 40768 | || ||||||||| |||| ||| || || || || || ||||| | || || Sbjct 4339 AAGTAATGATCTGCGCAACCTGATCGCGGCCATATTTTTCCTGG--ACGTAGCGAATAAC 4396 Query 40769 CTCGCCACGACG--CCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCG 40826 |||| | || || || | || ||| ||||| |||| ||| ||||| ||||||||||| Sbjct 4397 CTCGTCGCGCCGGTCCTGGCA--GAAATCGATATCGAAATCCGGCATCGACACGCGCTCC 4454 Query 40827 GGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCG 40886 ||||||||||| |||||||| | ||| | | ||||| || || |||||||| Sbjct 4455 GGGTTCAGGAAGCGCTCGAACAGAAGCGCAAACCGGAGCGGATCCAGATCGGTGATGGTC 4514 Query 40887 AGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCG 40946 || | |||| | | ||| || || | || || || || || || || | |||| Sbjct 4515 AGCGCCCAGGCCGCGACCGAGCCCGCACCCGACCCACGTCCCGGTCCAACAGGAATGCCG 4574 Query 40947 TTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTA 40990 | |||||||||| ||||||||||| |||| |||||||| Sbjct 4575 CGCGCCTTCGCCCATTTGATGAAGTCCGACACGATCAGGAAGTA 4618 >seq57003 Length=10244 Score = 86.0 bits (94), Expect = 2e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 39649 ACTCGGCTGGGTAGTGCGTCTTCAGCCACGCCGTGCGGTACGCGATGAGTCCGTACGCCG 39708 ||||||| | ||| ||||||||||||||||||||| |||||| | || | || || | Sbjct 92 ACTCGGCCGTGTAATGCGTCTTCAGCCACGCCGTGTGGTACGACAGCAGCGCATAGGCTG 33 Query 39709 CCGAGTGCGCCTTGTTGAAGGCGTAGCCAGCG 39740 | | ||||| |||||||||| ||||||| ||| Sbjct 32 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164627120484068