Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq110305 91.5 4e-13 seq77334 91.5 4e-13 seq49190 87.8 5e-12 >seq110305 Length=15565 Score = 91.5 bits (100), Expect = 4e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 251487 ACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGC 251546 ||| || |||||||| ||||||||||||||||| ||||| || ||||||||||| ||| Sbjct 11352 ACCATGGGAAATCATGCAATCACGCTCCATTTCCCCGAATCGTAGACCACCATCACGACT 11411 Query 251547 CCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTG 251606 |||||| || |||| || || || | | | ||||||| || || || Sbjct 11412 CCTACCTTCCACAGGTTGTCGCGTTAAGATCTGTACAGGACCGCGGGCTCGAGAGTGAAT 11471 Query 251607 CTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 |||||| | ||||| |||||||| | |||||| | | || |||| | ||| Sbjct 11472 CTTATCGTCCACCATGTGCTTGAGCCTTTGGTAGTACGTAGGTCCGAGGTAGA 11524 >seq77334 Length=160 Score = 91.5 bits (100), Expect = 4e-13 Identities = 108/146 (74%), Gaps = 3/146 (2%) Strand=Plus/Plus Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038 ||||| || || || || ||||| ||||| |||||| | ||| ||||||||| || Sbjct 14 CCGTGGTTTTTACGCAGGTCTAAAAATTCAAAAATATCGGCATGCCATGGCTCCAGGTAA 73 Query 156039 ATAGCAAAACTACCATTCCTCTTGCCAC---CCTGATCTACATACCGAGCAGTCTTATTG 156095 |||||||| || || | |||||||| ||||||||||||| || || || | ||| Sbjct 74 ATAGCAAAGGCGCCTTTACGCTTGCCACCACCCTGATCTACATAACGGGCGGTATCATTA 133 Query 156096 AAGACACCTAGCATAGGAATAATACC 156121 || || | ||||| || |||||||| Sbjct 134 AACACGCGCAGCATTGGGATAATACC 159 >seq49190 Length=333 Score = 87.8 bits (96), Expect = 5e-12 Identities = 129/182 (71%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038 ||||| || || || || || | |||||| ||||| | ||| ||||| | || Sbjct 194 CCGTGGTTTTTACGCAGGTCAAGGAATTCGAAGATATCGGCATGCCAAGGCTCTAAGTAA 135 Query 156039 ATAGCAAAACTACCATTCCTCTTGCCACC---CTGATCTACATACCGAGCAGTCTTATTG 156095 |||||||| ||| || | ||| ||||| |||||||||||| || || || | ||| Sbjct 134 ATAGCAAAGGCACCTTTACGCTTACCACCACCCTGATCTACATAGCGGGCGGTATCATTA 75 Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155 || || | |||||||| |||||||||||| || || || || |||| ||| | ||| Sbjct 74 AACACGCGCAGCATAGGGATAATACCATTGCTGGTACCGTTAGTACCGCTAATGTATGAA 15 Query 156156 CC 156157 || Sbjct 14 CC 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1469720609016737