Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021343.1 Length=35430 Score E Sequences producing significant alignments: (Bits) Value seq18243 174 4e-39 seq81106 98.7 2e-16 seq111000 93.3 1e-14 >seq18243 Length=2233 Score = 174 bits (192), Expect = 4e-39 Identities = 321/469 (68%), Gaps = 19/469 (4%) Strand=Plus/Minus Query 9372 CAGCGGCACGATTTCGTTCCGCCCGAACACGCGCGCGGCGGTGTCGGCCGCGCCGAACCC 9431 || |||| ||| ||||| ||| |||||||| || ||| | ||| | | ||||| || Sbjct 520 CAACGGCTTGATCTCGTTGCGCTCGAACACGGCCGAGGCCTTATCGACATCACCGAAGCC 461 Query 9432 GCCCGTGTTGCTCGGGACGATGCCAAGCAACTGCGGCGGAACGCGATGGGCCGCGAGCGT 9491 ||| | |||| || |||||||| |||| ||| ||||| || ||||| || || || Sbjct 460 GCCGGCGTTGGCGGGCACGATGCCCAGCAGCTGGGGCGGCACCCGATGCGCGGCCAGGAC 401 Query 9492 GTCGTCGCGCGTCACGTTCTTGATGTCGAAAAACTGGTCTTTCGCTGCAACCTCCGAAAT 9551 ||||||||||| ||||||||| ||| ||||| ||| || || || | ||| || Sbjct 400 GTCGTCGCGCGAGGTGTTCTTGATCCCGACAAACTCGTCCTTGGCGGCGATCTCGCTGAT 341 Query 9552 CGGGATCAGTTGGACCGCGCCTTTTTTCGCCGCCGCTGTTTCGCGCGGCCGAGTGCAGAA 9611 ||| || | |||| || | | | | ||||| || | ||||| | | Sbjct 340 CGGAATGATCTGGAT-GCCCTTCTCATGCCCGCC--TGGT----------GAGTGGATGA 294 Query 9612 ACAGGTTCCGGAAATTACCGATGCCCTTCGAGTCGCGTAAC---GCCTTCCGGATCGCGT 9668 | ||||||||||| || || ||||| ||||| | | ||||| ||| || | Sbjct 293 AGAGGTTCCGGAAGTTCCCCGGCCCCTTGCCCTCGCGCATCTTCGCCTT---GATGGCAT 237 Query 9669 CTACGTCGTCCGGGTCCATGTTCGGGTCGTTGAGGTACAGGATGAACCCGGCGTGCGAGC 9728 | || || ||| || ||||||| ||||| || | |||||| || ||| ||||||||| Sbjct 236 CGACCTCTTCCTGGCTCATGTTCTGGTCGGTGCTGCGCAGGATAAAGCCGACGTGCGAGC 177 Query 9729 CGTTCGCGTAGTAGCGGCGCCGGAACAGGGTGGCGGACTCGTTCAACCACGCGGATTGCA 9788 |||| |||||| ||| ||||||||||| |||| |||||| | |||| || |||| Sbjct 176 CGTTGAGGTAGTACTTGCGGCGGAACAGGGTCGCGGCCTCGTTGAGGAACGCTGACTGCA 117 Query 9789 ACGATGCGATGTACTCGGGCATCCCGTACACCTCCTGATTCACGTCCGG 9837 | | | ||| ||||| | ||||| || | ||| || | |||||| Sbjct 116 GGGCGCCAAGGTATTCGGGTAGGCCGTAGACGTTCTGGTTGATGTCCGG 68 >seq81106 Length=13242 Score = 98.7 bits (108), Expect = 2e-16 Identities = 207/300 (69%), Gaps = 14/300 (5%) Strand=Plus/Plus Query 1906 GCTACTTCGGCAGTAAGTTTCGCGTCGCGCCGTGGGTGCTCTCGCACCTGCCGTCGCATG 1965 ||||| |||| | ||||| ||| |||| |||||| | | | | ||| | || Sbjct 5143 GCTACCACGGCGGCAAGTTCCGCCTCGCACCGTGGATCGTGGGTTTCTTTCCGACCCACC 5202 Query 1966 AAATCTACGTCGAACCGTTCGGTGGCTCGGCTGGTGTGCTGCTGCAAAAG--CCGCGAAG 2023 | ||||||||| |||||||| || | ||| ||||||||||| ||| ||||| | Sbjct 5203 ATTGCTACGTCGAGCCGTTCGGCGGAGCAGCTTCGGTGCTGCTGCACAAGGACCGCG-CG 5261 Query 2024 CCGTGTCGAGATTTACAACGATCTCGACGGCGAAATCGTGAACCTATTCCGCGTGGTGCG 2083 | | |||| |||||||||| | ||| ||| |||| ||| | |||||||| |||| Sbjct 5262 CACAG-CGAGGTTTACAACGACGTGCACGACGAGGTCGTCAACGTCTTCCGCGTCCTGCG 5320 Query 2084 TGATGACGCGATGCGAGCGCAGTTGGTCGACGC---GTTGAACGCGACGCCATATGCCCG 2140 || || | | | |||||||| | ||| |||| || |||||| | ||||| Sbjct 5321 CGACCCCGAGCAGTCGGAGCAGTTGGCC--CGCATGGTTG-ACCTGACGCCCTTCGCCCG 5377 Query 2141 GGCCGAGTTCGAAGCAGCGTGGACCGTGGCA--GACGAACCGGTCGAGCGCGCACGCCGC 2198 ||| |||||||| || | | || | || ||||| |||||||||||||| |||||| Sbjct 5378 GGCTGAGTTCGAGGCCTCCT--ACGGGCACACCGACGACCCGGTCGAGCGCGCGCGCCGC 5435 >seq111000 Length=9260 Score = 93.3 bits (102), Expect = 1e-14 Identities = 118/161 (73%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 1930 TCGCGCCGTGGGTGCTCTCGCACCTGCCGTCGCATGAAATCTACGTCGAACCGTTCGGTG 1989 ||||||| ||| | ||||||| | ||| |||| | |||||||||||||| ||||||| Sbjct 216 TCGCGCCATGGATCATCTCGCATTTTCCGGCGCACGGGATCTACGTCGAACCATTCGGTG 275 Query 1990 GCTCGGCTGGTGTGCTGCTGCAAAAGCCGCGAAGCCGTGTCGAGATTTACAACGATCTCG 2049 || |||| || ||||||||||||| || || || |||| | |||||||| |||| Sbjct 276 GCGCGGCATCGGTCCTGCTGCAAAAGCAGCCCTGCGGTACCGAGGTCTACAACGACCTCG 335 Query 2050 ---ACGGCGAAATCGTGAACCTATTCCGCGTGGTGCGTGAT 2087 || ||| |||| || || || || ||| | || ||| Sbjct 336 ATAACCGCG---TCGTCAATCTGTTTCGGGTGCTCCGGGAT 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113104846219904