Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021533.1 Length=45942 Score E Sequences producing significant alignments: (Bits) Value seq108388 82.4 2e-11 >seq108388 Length=5846 Score = 82.4 bits (90), Expect = 2e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 3881 TTAGGCGCGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAGCCGCTGGCTGCAGGTTCGA 3940 ||||| | ||||||| ||||||||||||||||||||||| |||| || | |||||||| Sbjct 1072 TTAGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGCAGGTCGTAGGTTCGA 1131 Query 3941 GTCCTGCCGCGTCTGCTACT 3960 | ||||| || |||| ||| Sbjct 1132 GACCTGCTGCCCCTGCCACT 1151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146698826313248