Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq107653 316 2e-81 seq93596 86.0 7e-12 >seq107653 Length=176415 Score = 316 bits (350), Expect = 2e-81 Identities = 532/757 (70%), Gaps = 36/757 (5%) Strand=Plus/Minus Query 102455 CTTTCGGACGCTGCCTCTGGCACCGCTTTCCGTGAGATGGGATTCTCTATCGAGAAAGTT 102514 || ||||| ||| ||| ||| |||| | |||||||| ||| |||||||| || Sbjct 133177 CTCTCGGAA-CTGACTCGAACACTGCTTGGCCTGAGATGGCCTTCAGCATCGAGAAGGTC 133119 Query 102515 AGCGTCACCGCTAAGTCTCGTGCCCTGAAGGCAGAGTACAGCCTTGAGCTTGCTCAAGAC 102574 | |||||| || ||| || || ||| || |||||| | || || || || ||| Sbjct 133118 ACCGTCACGGCGAAGAGCCGCGCGCTGGCCGCCGAGTACTCGATGGAACTGGCACAGGAC 133059 Query 102575 CTGAAGGCGATTCATGGTTTGGATGCTGAGCAAGAGCTCGCAAACATCCTCAGCACTGAA 102634 |||||||| | || ||| | || || ||| |||||| | ||||||||| ||| || Sbjct 133058 CTGAAGGCAGTACACGGTCTCGACGCCGAGGCTGAGCTCTCGAACATCCTCGCCACCGAG 132999 Query 102635 ATCCTTGCTGAAATCAACCGTGAAGTTGTTCGTACCATC------TACGTAAACGCTGTT 102688 ||||| || || |||||||| || | |||||||| || | || || || | Sbjct 132998 ATCCTGGCCGAGATCAACCGCGAGGCGGTTCGTACGGTCCTGACCTCCGCCAA-GCAG-- 132942 Query 102689 GCTGGTGCTCAGAACAACACTGCTAACGCTGGTATCTTCGACCTCGACGTTGACTCCAAC 102748 || | |||| | |||| | ||| | || |||||||||| ||||| ||||| ||| Sbjct 132941 ---GGATCGCAGATCGACACGACCAACCCGGGCTTCTTCGACCTGGACGTCGACTCGAAC 132885 Query 102749 GGTCGCTGGTCTGTTGAGAAGTTCAAGGGTCTGCTGTTCCAAATCGAGCGCGA-TGCAAA 102807 || |||||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct 132884 GGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATTTCCACATCGAGCGCGAGTGCAAC 132825 Query 102808 CGCAATCGGTCAGCAAACTCGTCGTGGCAAGGGTAACATCCTGATCTGCTCCGCTGACGT 102867 | | ||| || | || | ||||||||||||||||||||||||||| | || ||||| Sbjct 132824 CAGA-TCGCCAAGGAGACGAGGCGTGGCAAGGGTAACATCCTGATCTGCACGGCGGACGT 132766 Query 102868 TGCTTCTGCACTTGGCATGGCAGGCGTTCTGGATTACACCCCCGCTCTGGCTGGTAACAA 102927 || || || || | || ||| || | || || ||| ||| |||| Sbjct 132765 GGCATCGGCTCTGAACGCCGCCGGCTACCT---CTCCATGCCGAACCTG---GGTGACAA 132712 Query 102928 CGCTCTGACTGGCGTTGACGACACCTCCAGCACTCTGGTTGGTACTCTCAACGGTAAGAT 102987 | ||| | | || |||||||| || ||| | | |||| || |||||| || Sbjct 132711 C-CTC---CAG--GTCGACGACACGGGCAACACCTTCGCGGGTATCCTGAACGGTCGCAT 132658 Query 102988 TAAGGTCTACGTTGACCCCTATTCTGCTAACGTTGCTGACAAGCACTTCTACGTTGCAGG 103047 ||||||||| | |||||||| || | || || || || || | | ||| ||| Sbjct 132657 CAAGGTCTACATCGACCCCTA---CGCGATCG--GCGGA-AACTACATGTGCGT---AGG 132607 Query 103048 TTATAAGGGCGCTAACGCTTTCGACGCAGGTCTCTTCTACTGCCCATACGTTCCTCTCCA 103107 || ||||| | | ||| |||||| || ||||||||||||| |||||||||||||| Sbjct 132606 CTACAAGGGTCCGACGCCTTACGACGCCGGCATCTTCTACTGCCCGTACGTTCCTCTCCA 132547 Query 103108 GCAGGTTCGTGCTATCAACCCTGACACCTTCACTCCAAAGATTGGCTTCAAGACCCGCTA 103167 ||||||||||||| | || | | |||| ||| || ||||||||||||||||| Sbjct 132546 GCAGGTTCGTGCTGTGTGGCCGGGTAACTTCGGTCCTCGCATCGGCTTCAAGACCCGCTA 132487 Query 103168 CGGCATGGTCTCGAACCCCTTCGCTCAAGGTCTCACC 103204 |||||||||| ||||||||||||| || || || ||| Sbjct 132486 CGGCATGGTCGCGAACCCCTTCGCACAGGGACTGACC 132450 >seq93596 Length=211 Score = 86.0 bits (94), Expect = 7e-12 Identities = 55/59 (93%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 147060 TAGCTCAGC-GGATAGAGCAACTGCCTTCTAAGCAGTTGGTCGCAGGTTCAAATCCTGC 147117 ||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||||| Sbjct 14 TAGCTCAGCTGGATAGAGCACCTGCCTTCTAAGCAGGTGGTCGCAGGTTCGAATCCTGC 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548858417993720