Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021538.1 Length=59626 Score E Sequences producing significant alignments: (Bits) Value seq109371 232 3e-56 seq69633 87.8 7e-13 >seq109371 Length=32687 Score = 232 bits (256), Expect = 3e-56 Identities = 479/703 (68%), Gaps = 21/703 (3%) Strand=Plus/Plus Query 46525 CAACAACGACTGCGTTCACGAAACCAAGAGCATGGCAGACGATTCGGTGGATCTGATCGT 46584 |||| |||||||||| || || ||| | ||||||| ||| || | ||| || | Sbjct 22916 CAACGACGACTGCGTGCAGGAGACCCGGCGCATGGCGTCCGACAGCGTCGGCCTGGTCCT 22975 Query 46585 CACCAGCATTCCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCA 46644 |||||||| || ||| || || ||||||||| |||||| || | ||||||||| || Sbjct 22976 GACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCGAACTTCGCCGACTTCGGGCA 23035 Query 46645 CACCGACAACAACGAGCACTTCTGGCAGCAGATGGACTACCTCACACCGCAGCTGCTGCG 46704 |||||| | |||||||||||||| ||||||||||||||||| ||| |||||||||| Sbjct 23036 CACCGATAGCAACGAGCACTTCTTCCAGCAGATGGACTACCTGGTGCCGGAGCTGCTGCG 23095 Query 46705 CATCCTCTCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTT---GTTCGG 46761 | | || ||| ||| | | || |||||||||| |||||||| | | ||| Sbjct 23096 CGTGCTGATGCCAGGCAGGGTGGCGGCGATCCACGTCAAGAACCGCATCGTGCCGAGCGG 23155 Query 46762 AAACGTCACCGGCGCCGGCGTGCCCACGGTGTCACCCTTCCACGCCGAGGCGATCTTCCA 46821 | ||| |||| ||| | | || | || || ||| || || || | | Sbjct 23156 CATGGTCGAGGGCGTTGGCTTCCAGACCGAGTACCCGTTCGACATGGACACGCTGGCCTG 23215 Query 46822 CGGACGCAAACACGGCTTCGACTACCTCGGCATGATCACCGTCATCACCGATGTGGTCCG 46881 | ||| ||||||||| ||||| ||||| | || ||||||| || |||||||| Sbjct 23216 CTTTCGCCGGCACGGCTTCCACTACATCGGCCGCAAGCCCATCATCACGGACGTGGTCCG 23275 Query 46882 GGAAAACAACCAGACGTACCGGCTGGGCTGGTCAGAGCAGTGCAAAGACGCCACCAAGAT 46941 ||| ||||||||||| ||| ||||||||||| ||||| ||||| |||| | | || Sbjct 23276 GGAGAACAACCAGACCTACAGGCTGGGCTGGAGCGAGCAATGCAAGGACGGTAGCCGCAT 23335 Query 46942 GGGCGTCGGCTCCCCGGAATACATTCTGTTGTTCCACAAACCGCAAACAGACAGGTCGAA 47001 |||| ||||| || ||| | ||| | |||| ||| ||| || ||| | | | Sbjct 23336 GGGCTTCGGCCTGTGCGAGTACCTGCTGCTCTTCCGCAAGGCGCCGACCGAC-GCTAGCC 23394 Query 47002 G-GGATACGCCGACACACCCGTCACCAAATCCAAGGACGACTACACCCGTGCCCGTTGGC 47060 | || || |||||| ||| ||| ||| ||||| ||| ||| |||| | || |||| Sbjct 23395 GTGGCTATGCCGACCTACCGGTCTTCAAGGACAAGGCCGAGTACTCCCGCCCGCGCTGGC 23454 Query 47061 AGGTGGACGCGCACGCATT---CTGGCGCTCGAGCGGAAACAGGACACTGACAGCCGACG 47117 || | || || |||| || | | ||||| ||| | | ||||| |||| | Sbjct 23455 AGCTCGATGCCCACGGCTTTGCCCGCAGCTCGGGCG---ATCGCTTGCTGACGCCCGAGG 23511 Query 47118 AGCTCGCCGCGCTG--CCACCAGACCAGCTGGCCTCA--CTGTTCACCAAGCACAGCCTG 47173 | |||| || |||| |||| | || || ||| ||||| ||||||| | || Sbjct 23512 AACTCGACGGGCTGACCCACGCGGACATCT----TCAAGATGTTCCGCAAGCACTCCATG 23567 Query 47174 CAGGACGTCTACGACTACCAGTCAC-ACGTCCGCATCGGTGAG 47215 | || ||||||| | || ||| |||| |||||||||||| Sbjct 23568 GAACGGGTGTACGACTTCGAG-CACGACGTGCGCATCGGTGAG 23609 >seq69633 Length=120 Score = 87.8 bits (96), Expect = 7e-13 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 46655 AACGAGCACTTCTGGCAGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCTCG 46714 |||||||| |||||| |||||||||| | ||| | ||||||||||||||||| || || Sbjct 113 AACGAGCATTTCTGGGAGCAGATGGATTTCCTGATCCCGCAGCTGCTGCGCATTCTGGCG 54 Query 46715 CCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGA 46762 || || || ||| ||| ||| || ||||| |||||| || |||| Sbjct 53 CCCGGGCGGATCGCGGCCATCCATGTGAAGGATCGCATCGTGCCCGGA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190429802682856