Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq58313 159 4e-33 seq111099 143 3e-28 seq107681 131 2e-24 seq79630 129 7e-24 seq109393 116 5e-20 seq109776 114 2e-19 seq51923 114 2e-19 seq109315 113 5e-19 seq69483 96.9 4e-14 seq25456 93.3 5e-13 seq101313 91.5 2e-12 seq25363 91.5 2e-12 seq107424 87.8 2e-11 >seq58313 Length=1260 Score = 159 bits (176), Expect = 4e-33 Identities = 199/274 (73%), Gaps = 9/274 (3%) Strand=Plus/Minus Query 869174 TGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCG 869233 ||||||||||| ||||| |||| ||||| || || | || || ||||| | ||| Sbjct 312 TGCGAACCTTCATCGCGCGATATCAGCTCGTTACTGAAAGTCAGCCCTGGCATCAATCCG 253 Query 869234 CGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCG 869293 || || || ||||| ||||| | ||||||||| ||||| || |||||||| || || || Sbjct 252 CGTTTTTTCAGCCAGAAGATAGAGCAGAAACTACCCGAAAAGAAGATGCCTTCAACCGCA 193 Query 869294 GCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATC 869353 ||||| | | | |||||||||||| || || ||||||||||| || | Sbjct 192 GCAAATGCCACCAAACGCTCGGCAAAGTTGCCG---------TTGTTGATCCAGCGCAGC 142 Query 869354 GCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCC 869413 ||||| ||||| || ||| ||| | || | |||||||| ||| | || | | ||| Sbjct 141 GCCCATTCGGCTTTCTTCTGCACACATGGTATGGTGTCGATAGCGTGGAACAACCGATCC 82 Query 869414 TTTTCGGCCGGGTCCTTGACATAGGTGTCGATCA 869447 |||||||||||||| || || || |||||||||| Sbjct 81 TTTTCGGCCGGGTCTTTTACGTAAGTGTCGATCA 48 >seq111099 Length=33184 Score = 143 bits (158), Expect = 3e-28 Identities = 301/436 (69%), Gaps = 26/436 (6%) Strand=Plus/Minus Query 18064 AGCACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTC 18123 ||||| |||||| | | ||| | ||||||| ||| |||||| ||||| ||| | || Sbjct 9614 AGCACCTTCGGCGAACTGTTTCGCGTCACCAACTTCGGCGAGAGCCACGGCCCGGCCATC 9555 Query 18124 GGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCT 18183 |||||| ||||||||||| ||||| || |||| || |||||||||||||||||| Sbjct 9554 GGCTGCGTCATCGACGGCTGCCCGCCCGGCCTGCCGCTCAGCGAGGCCGACATCCAGCCC 9495 Query 18184 CAGTTGGATCGGCGCCGACCGGG--CCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCG 18241 | |||| || ||||| ||||| |||| ||| | ||||| |||||||||||| | Sbjct 9494 GAACTGGACCGCCGCCGCCCGGGCACCAGCCGCCACGT--CACGCAGCGCAACGAGCCGG 9437 Query 18242 ATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCC 18301 || || |||| ||||||| | | || || ||| |||| |||| || ||| Sbjct 9436 ATGCGGTGGAGATCCTGTCGGGCGTCTACGAGGGGCTGACGACCGGCACGCCGATCTGCC 9377 Query 18302 TCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACAT--GTGCAAGGTGCC 18359 | | | | ||| ||||||||| | ||||| | |||| | | | || Sbjct 9376 TGCTGATCGAGAACACCGACCAGCGCAGCAAGGACTACGGCAACATCCTCGACACCTTCC 9317 Query 18360 GCGGCCCTCACACGCCGACTACACCTACATGGC-CAAGTACGGCAT---CAA--GGCGTC 18413 || || ||||||||||||||||||| |||| |||||||||| | | | ||| Sbjct 9316 GC--CCAGGACACGCCGACTACACCTAC-TGGCGCAAGTACGGCCTGCGCGACCCGCGCG 9260 Query 18414 GTCG-GGCGGAGGC-CGG-TCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGC 18470 || | ||| | | | ||| ||||||| ||||| | |||| |||| ||||||||| Sbjct 9259 GTGGCGGCCGCGCCTCGGCTCGTCTGACCGCG-----CCCATG---GTCGGCGCCGGCGC 9208 Query 18471 GGTCGCCGAGAAATGG 18486 ||| ||| |||||| Sbjct 9207 GGTGGCCCGCAAATGG 9192 >seq107681 Length=5071 Score = 131 bits (144), Expect = 2e-24 Identities = 202/290 (70%), Gaps = 9/290 (3%) Strand=Plus/Minus Query 869174 TGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCG 869233 || |||||||| ||||| |||| |||||| ||||||| | |||||||| ||||| Sbjct 4202 TGTGAACCTTCATCGCGCGATATCAGTTCGTTACTAAAGGTCAATCCGGGCATCAGGCCA 4143 Query 869234 CGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCG 869293 || || || | ||| ||||| | ||||| || || || || || ||||| || || || Sbjct 4142 CGTTTTTTTAACCAGAAGATAGAACAGAAGCTCCCTGAAAAGAAAATGCCTTCAACAGCC 4083 Query 869294 GCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATC 869353 ||||| | | | ||||||||||||||| || ||||||||||| || | Sbjct 4082 GCAAATGCTACCAAACGCTCGGCAAAGGTGCCG---------TTGTTGATCCAGCGCAGC 4032 Query 869354 GCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCC 869413 ||||| || ||||| || ||| | || | ||| || | ||| | || | | || Sbjct 4031 GCCCACTCTGCCTTCTTTTGCACACATGGAATCGTATCAACCGCGTGGAACAAACGATCT 3972 Query 869414 TTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||||| ||||||| || | || || || ||||| |||| |||||||| Sbjct 3971 TTTTCAACCGGGTCTTTAATGTAAGTATCTATCAGTAGCGCGTAGGTCTC 3922 Score = 86.0 bits (94), Expect = 8e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || |||||| || ||||||||| | | || | | ||| Sbjct 3920 GAGTGGATGTTCTCCATCATGATCTGAAAACCGTAAAAGCAACGGGCTTCGGGTAATTGC 3861 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| ||||||| | || ||||| ||| ||| || || ||||||||||| ||| Sbjct 3860 ACCTCGCTCATGAAGTTCACAGCAAGGTTTTCGTTCACAATACCATCGCTGGCGGCAAAA 3801 Query 869753 AAAGCCAGGACGTGC 869767 |||||||||| |||| Sbjct 3800 AAAGCCAGGATGTGC 3786 >seq79630 Length=255 Score = 129 bits (142), Expect = 7e-24 Identities = 131/168 (78%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 ||||||||||||||||| |||| ||||||| || | ||| || | ||||||| Sbjct 233 TGCGGCTGGGCGGCGGCCAGCACCGCGTCGACCGCGACCTTCACATCGCCATTGGTGCCG 174 Query 1726745 TTCTTGAAGCCGAT-GGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTC 1726803 ||||||||||||| || ||| | || |||| |||||||| ||||| | |||||| || Sbjct 173 TTCTTGAAGCCGACCGGGCAGGAG-AGGCCCGAGGCCATCTCACGGTGGATCTGGCTTTC 115 Query 1726804 GGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA 1726851 ||||||||||||||| | |||||||| ||||| ||||| || | ||| Sbjct 114 GGTCGTGCGCGCGCCGATCGCGCCCCAGGCCACGAGGTCGGCGATATA 67 >seq109393 Length=13710 Score = 116 bits (128), Expect = 5e-20 Identities = 81/92 (88%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGC 1726792 |||||||||||||||||||| ||||||| | || ||| |||| |||| |||||||||| Sbjct 13619 CCGTCGGTGCCGTTCTTGAAACCGATGGGCGCCGACAGGCCCGAAGCCAGCTCGCGGTGC 13678 Query 1726793 ACCTGGCTCTCGGTCGTGCGCGCGCCCACGGC 1726824 |||||||||||||||||||||||||| | ||| Sbjct 13679 ACCTGGCTCTCGGTCGTGCGCGCGCCGATGGC 13710 >seq109776 Length=48066 Score = 114 bits (126), Expect = 2e-19 Identities = 201/288 (70%), Gaps = 11/288 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 |||||||| || ||||| | || ||| ||| | | |||||||||||| ||||||||| Sbjct 3927 CCTTCGTCTCGGCTGATGAGCTCATTGGAAAATGTCAAGCCGGGCATGAGACCGCGCTTC 3986 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || |||||||| ||||| |||| || ||||| ||||| ||||| || || ||||| Sbjct 3987 TTCAGCCAAAAAATGGCCGCGAAAGAACCGGAGAAGAAGATCCCCTCAACCGCAGCAAAA 4046 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCC 869356 ||||||| ||||| ||||| ||| | || ||||| ||||| | ||| Sbjct 4047 GCGATGAGGCGCTCAGCAAA-----CGAAG-TCTTCTTGTCCGAAATCCAGCGAAGAGCC 4100 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCG-CGAAAGAGGTGGTCCTT 869415 || || || || | | || | || | || |||| ||| ||||| |||| || Sbjct 4101 CATTCTGCTTTGCGCTTGACACAGGGAATGGTCTCGACAGCGTCGAAA-AGGTATTCACG 4159 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||| || ||||| || | || || || || || ||||| |||||||| Sbjct 4160 TTCAGCAGGGTCTTTAATGTAAGTATCAATGAGAAGCGAGTAGGTCTC 4207 Score = 107 bits (118), Expect = 2e-17 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 ||||| || || | ||| || |||||| |||||| ||||| |||||||||| ||| Sbjct 3554 GACGTTGGCTTTCGAGTAGTCTGACACGCGTTTCTCGAAGAAGTTAGTCTTGCCCTGGAG 3613 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803 ||||||| ||||| | ||| ||||| | | |||||| ||| || ||||| Sbjct 3614 TGAGATCATATCCATGAAGTCGAATGGGTTCGTAGACTTGTAAATCTTCTCATTGCCGAG 3673 Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863 | |||| ||||| ||||| || || |||||||||||||| || ||||||||| Sbjct 3674 AGCAATTAGCAACCGGTCAGCGACGAATTCAATGTACTGGCACATTAGTTTGGCGTTCAT 3733 Query 868864 GCCGATGAG 868872 ||||||||| Sbjct 3734 GCCGATGAG 3742 >seq51923 Length=1435 Score = 114 bits (126), Expect = 2e-19 Identities = 84/98 (86%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGC 1726792 |||||||| ||||||||||||||||| | || ||| |||| |||| |||||||||| Sbjct 99 CCGTCGGTTCCGTTCTTGAAGCCGATAGGTGCCGACAGGCCCGAGGCCAGCTCGCGGTGC 40 Query 1726793 ACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCA 1726830 |||||||| ||||||||||||||||| | ||||||||| Sbjct 39 ACCTGGCTTTCGGTCGTGCGCGCGCCGATGGCGCCCCA 2 >seq109315 Length=4223 Score = 113 bits (124), Expect = 5e-19 Identities = 217/313 (69%), Gaps = 13/313 (4%) Strand=Plus/Plus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGA-TGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTG 1726791 || |||||||||||||||||||||| || || || |||| |||| |||| ||||||||| Sbjct 2 CCATCGGTGCCGTTCTTGAAGCCGACCGGGCA-CGACAGTCCCGAGGCCAGCTCGCGGTG 60 Query 1726792 CACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA 1726851 |||||| |||||| ||||||||||| | |||||||| | |||||| || | || Sbjct 61 CACCTGCGACTCGGTGGTGCGCGCGCCGATCGCGCCCCAGCTGATCAGGTCGGCGATGTA 120 Query 1726852 -AGGGGCCACCAGAGGACTGAGAAACTCG---ACGGCCACGGGCTGATCGACGGCGACGA 1726907 | || | | | | ||||||||| ||||| ||| | | || || Sbjct 121 CTGCGGACTGATCACGTC-AAGAAACTCGGTACCGGCC---GGCAAGCCCATCTCGTTGA 176 Query 1726908 CGAGATCGCGCAACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGT 1726967 | ||||||| ||| ||||| | |||||||||| | |||| | || Sbjct 177 TG---TCGCGCAGCAGCTCGCGCGCCATGCGCAGGCCGTCGTTGATGCGGAAACTGTTGT 233 Query 1726968 CGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACAT 1727027 | | | || ||| || || ||||||||| ||||| || |||||||||||||||| || Sbjct 234 CCATGAACGGATCGTTGATCAAGCCCTTCCAGCCGACCGTGGTGCGCGGCTTTTCGAAAT 293 Query 1727028 AGGCGCGCATGAC 1727040 | |||||||||| Sbjct 294 ACACGCGCATGAC 306 >seq69483 Length=1966 Score = 96.9 bits (106), Expect = 4e-14 Identities = 145/200 (73%), Gaps = 12/200 (6%) Strand=Plus/Plus Query 1726965 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 1727024 |||| |||| ||||||| || |||||||||||| || ||||| |||||||||||||||| Sbjct 21 CGTCCAGGTAGGGGTCGTTGATCAGGCCCTTCCAGCCCACGGTGGTGCGCGGCTTTTCGA 80 Query 1727025 CATAGGCGCGCATGACCA-CGCAAAGCGCGTCGCCG-ACCTC-GTCTCGGACAAAGGCGC 1727081 ||| ||||||| || | | | || || |||| || | || | | | | |||| Sbjct 81 AGTAGACGCGCATCACGATCTCCAA-CGTGTCGGCGTATTTCAGGCGCTG-----GGCGT 134 Query 1727082 GCAGGCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGA 1727141 ||||||| ||| | || || | |||| ||||||||||| || || || ||| | Sbjct 135 GCAGGCGGCGGGCGTATTCCAGCGCGGCGGCCGGGTCGTGGATGGAGCAAGGGCCA---A 191 Query 1727142 TAACCAGCAGCCGCCGGTCG 1727161 | |||| |||| | |||||| Sbjct 192 TCACCACCAGCAGGCGGTCG 211 >seq25456 Length=2527 Score = 93.3 bits (102), Expect = 5e-13 Identities = 155/221 (70%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 1630108 GGCACGAGGCCGTTGGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACC 1630167 ||||| | ||| | |||| ||||||||||||| | || ||||||| ||||||||| Sbjct 2463 GGCACCACGCCTTGCGACTTGCCGTTGGTGCCCTTGATGTGGGCGCCGAGCGCGCGCACC 2404 Query 1630168 TTGTGCGCGGCAAAGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGC 1630227 | | | | |||| ||||||||| |||||| | |||||| | |||| Sbjct 2403 GGGGTCCAGTCGTTACCGAGGCCGCCGGCGTACTTGGCCAGCAGCGCGTTTTCCTTGATG 2344 Query 1630228 GTGTCGTAGATGCCCTCGATCGAGTCGGCCTTCA-TGTCCACGAGAAAGCACGACGAGTT 1630286 | |||||||||||| |||| |||| || || ||| | || |||||||||| Sbjct 2343 GCGTCGTAGATGCCTTCGA---GGTCGTCCGACACCGTCGTC-AGGTAGCACGACGACAG 2288 Query 1630287 TTGCGGGTGCGCCGTGCCGGCGTTGAAGAGCGTGGGCGTCG 1630327 ||||| | || |||||| | |||||| ||||| ||||||| Sbjct 2287 TTGCGAGCGCAGCGTGCCCGAGTTGAACAGCGTCGGCGTCG 2247 >seq101313 Length=130 Score = 91.5 bits (100), Expect = 2e-12 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 869638 GATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTC 869697 ||| ||||| || ||||||||| ||||||||| | | |||| | | || ||||| Sbjct 1 GATATTCTCCATCATGATCTGGAAACCGTAAAAGCAGCGCGCCTCAGGTAACTGTACCTC 60 Query 869698 CTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGC 869757 ||||||| ||||||||||||| |||||| || ||||||||||| ||||| || Sbjct 61 ACTCATGAAATTCACGGCCAGGTTCTCATTCACGATACCATCGCTGGCGGCAAAAAATGC 120 Query 869758 CAGGACGTGC 869767 ||||| |||| Sbjct 121 CAGGATGTGC 130 >seq25363 Length=177 Score = 91.5 bits (100), Expect = 2e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 869336 TTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATG 869395 ||||||||||| || | |||||| ||||||||||| | || | || || || || || Sbjct 19 TTGTTGATCCATTTTAACGCCCACTCGGCCTTTTTACCTACACATGGTACGGTATCAATA 78 Query 869396 GCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAA 869455 ||| | || ||| ||||||||||||| ||||| || | ||| || || ||||| | | | Sbjct 79 GCGTGGAACAGGCGGTCCTTTTCGGCAGGGTCTTTAATATAAGTATCTATCAGTAAGGCA 138 Query 869456 TAGGTCTC 869463 ||||| || Sbjct 139 TAGGTTTC 146 >seq107424 Length=19251 Score = 87.8 bits (96), Expect = 2e-11 Identities = 108/144 (75%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 1726704 GCACGGCGTCGAGTGCCGTCG-CCACGCTCCCGTCGGTGCCGTTCTTGAAGCCGATGGCC 1726762 ||||| |||||| || | || ||||||||||||||||| |||||||||||| | | | Sbjct 13112 GCACG-CGTCGATCGC-GACGTCCACGCTCCCGTCGGTGGAATTCTTGAAGCCGGTAGGC 13169 Query 1726763 AGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGCGCGCCCACG 1726822 | | || ||| |||| || |||||||||||| || |||||||||||||| | Sbjct 13170 ATGGACAAACACGATGCCAGTTCCCGGTGCACCTGGGATTCTGTCGTGCGCGCGCCGATC 13229 Query 1726823 GCGCCCCACGCCACCAGGTCTGCC 1726846 || ||||| | ||||| ||| || Sbjct 13230 GCTCCCCAAGACACCAAATCTTCC 13253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6098013525185717