Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021864.1 Length=55282 Score E Sequences producing significant alignments: (Bits) Value seq15770 129 2e-25 seq36914 107 7e-19 seq19732 86.0 2e-12 >seq15770 Length=411 Score = 129 bits (142), Expect = 2e-25 Identities = 173/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 14347 TGATTTTGGCTGTAATCCTTGCAGTGAAATTATCTTGCGTCCATACCAGTTCTGTAATCT 14406 ||||||||| ||| |||||| |||||| || | | ||||| || || ||||| || Sbjct 379 TGATTTTGGAACTAACCCTTGCTCTGAAATCATACTCAGACCATATCAATTTTGTAACCT 320 Query 14407 ATCAGAGGTAGTAGCACGTGCTGGTGACACACAGCAGACGCTAAGTAACAAGGTACGCTT 14466 ||||| || || | || |||| ||||| | | ||| | | ||||| | Sbjct 319 CTCAGAAGTTGTGGTCCGATCTGGAGACACTGTTGAATCTCTACTTGATAAGGTCGAAAT 260 Query 14467 GGCTACAATCTTGGGTACATTCCAGTCTACGTTAACTAACTTTAAATACATTCGTAACAT 14526 || |||||| | || || || || || || |||||||||||| |||| | ||||| || Sbjct 259 TGCAACAATCCTTGGAACTTTTCAATCAACATTAACTAACTTTCCATACCTCCGTAAAAT 200 Query 14527 CTGGAAGAAGAACACAGAGGAAGAAAGACTGTTGGGTGTATCGCTTACTGGTATCATGGA 14586 |||| | ||||| ||||| ||||||||||| | || ||||| || || ||||||||||| Sbjct 199 CTGGCAAAAGAATACAGAAGAAGAAAGACTCCTTGGCGTATCTCTGACAGGTATCATGGA 140 Query 14587 C 14587 | Sbjct 139 C 139 >seq36914 Length=480 Score = 107 bits (118), Expect = 7e-19 Identities = 170/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 14924 AAGTCACCTACAGGTGCAGTAACACGTACTGAAATGACAGCCATAGAACAACTAGACTTG 14983 ||| | ||| |||||| | ||| | | |||||||||||| || |||||||| || | Sbjct 8 AAGGCTCCTGAAGGTGCTATCACAAGAAATGAAATGACAGCTATTGAACAACTTGAACTA 67 Query 14984 TGGCTACTGTATCAGCGTCACTGGTGTGAGCATAAGCCTAGTGTAACCATTACAGTCAAA 15043 ||| | ||||| | || |||||||| || || || ||| || ||| | || | Sbjct 68 TGGAAGATATATCAACTCCATTGGTGTGAACACAAACCCTCTGTGACTATTTCTGTTCGA 127 Query 15044 GAAGATGAATGGTTTGAGGTAGGCGCGTGGGTATATAAAAACTTTGATGAAGTGTCAGGT 15103 || | |||||| || ||||| || ||||| ||||| || |||||| | | |||||| Sbjct 128 GATAACGAATGGCCAGAAGTAGGTGCTTGGGTCTATAATAATTTTGATTATATTTCAGGT 187 Query 15104 ATTAGTTTCCTGCCTTTTGATGACCACACATACCAGCAAGCACCTTATCAGGACATTGAT 15163 | || ||| |||| | ||||||| || ||| || || || ||||| || |||| Sbjct 188 GTAAGCTTCTTGCCGATGAATGACCATACTTACAGACAGGCTCCCTATCAAGAATGTGAT 247 Query 15164 GAAG 15167 |||| Sbjct 248 GAAG 251 >seq19732 Length=1721 Score = 86.0 bits (94), Expect = 2e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 42015 GCGTTATCGACAGCCATACGCATAAACCCATTCATAAGAGTTTGTGTGTCGTCCATGTTC 42074 || ||||| || |||| |||||||| |||||||| || || ||||| ||| ||| Sbjct 521 GCATTATCTACCGCCAGTCGCATAAAACCATTCATGAGCAACTGGGTGTCAAGCATATTC 462 Query 42075 TCTGCGATACCTACACCAAAGAAGGAGTATGGGTTCAGTTCGTATGGTGCAGCGTGATAT 42134 ||||| | |||||||||||||| ||||| || || | ||| || || ||| | ||| Sbjct 461 TCTGCAACACCTACACCAAAGATAGAGTAGGGATTGATTTCATAAGGAGCAAGATTATAA 402 Query 42135 GGAATGCGGCTAGGCTTAAATGGATTAAGAACCATACGAA 42174 ||||| || ||| | || ||||| | || | ||||| Sbjct 401 GGAATACGAGCAGGAGTGAAAGGATTGAATACTAGACGAA 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176547358854328