Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021867.1 Length=46978 Score E Sequences producing significant alignments: (Bits) Value seq13114 93.3 1e-14 seq94348 91.5 4e-14 seq92209 91.5 4e-14 >seq13114 Length=313 Score = 93.3 bits (102), Expect = 1e-14 Identities = 145/206 (70%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 35344 GTGGTTGCTCACTTTCACTTAGTAATGGTATTT-CTGCATTGTACGGATTCTTTGCTGGT 35402 || ||||||||||| ||| | ||||||| | |||| | | || | || || ||| Sbjct 279 GTTGTTGCTCACTTCCACCTGGTAATGGGTTCGGCTGCGATATTTGGTATGTTGGCCGGT 220 Query 35403 GTTTACCACTGGTTTCCAAAAATGTTCGGGCGTATGATGAATAAAAATTTAGGTTATATT 35462 |||||||| |||||||| |||||||| || ||||| | | | ||||| | Sbjct 219 GTTTACCATTGGTTTCCTAAAATGTTTGGTAAGCTGATGGACGAGCGCCTGGGTTACCTG 160 Query 35463 CACTTTTGGATTACTGCAATTTGTGCTTATGGTGTTTTCTATCCAATGCACTTTATAGGG 35522 ||||||||| | || || |||||||| || || | |||||||||||||| || Sbjct 159 CACTTTTGGTTAACCTTTATCGGTGCTTATCTGGTATTTTTCCCAATGCACTTTATGGGC 100 Query 35523 ATGGCTGGATTACCACGTCGTTACTA 35548 ||| ||| ||||||| |||||||| Sbjct 99 TTGGATGGTGTACCACGCCGTTACTA 74 >seq94348 Length=2107 Score = 91.5 bits (100), Expect = 4e-14 Identities = 131/181 (72%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 35658 TTTACTAGTATTTTTTACGGaaaaaaaGCTGTGCAAAATCCATGGAGGTCTAATACTCTT 35717 |||||| ||| || | || || |||||| || || || ||| ||| ||||| | Sbjct 2105 TTTACTC-TATCTTCTGGGGTAAGAAAGCTACACAGAACCCGTGGCAGTCGAATACCTTA 2047 Query 35718 GAGTGGACTACACCAGTGGAACATGTACATGGAAACTGGCCAGGTGCTATCCCAGAAGTT 35777 |||||||||||||| || ||||| | ||||| |||||||| || | || ||| || Sbjct 2046 GAGTGGACTACACCGGTTGAACACTTGCATGGCAACTGGCCGGGCGAAATTCCAACTGTA 1987 Query 35778 TATAGATGGCCTTATGATTACAGTAAACCAGG-GCATGACGAAGATTTTGTTCCTCAAAC 35836 || | ||||| ||||||||||| ||||| || ||| || || ||||| | || || || Sbjct 1986 TACCGTTGGCCGTATGATTACAGCAAACCGGGTGCA-GAAGAGGATTTCATCCCACAGAC 1928 Query 35837 T 35837 | Sbjct 1927 T 1927 >seq92209 Length=1142 Score = 91.5 bits (100), Expect = 4e-14 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 35694 AATCCATGGAGGTCTAATACTCTTGAGTGGACTACACCAGTGGAACATGTACATGGAAAC 35753 || || ||| | || || ||| | ||||||||| | || || ||||| | ||||| ||| Sbjct 38 AACCCTTGGGGATCAAACACTATAGAGTGGACTGCTCCGGTAGAACACCTGCATGGTAAC 97 Query 35754 TGGCCAGGTGCTATCCCAGAAGTTTATAGATGGCCTTATGATTACAGTAAACCAGGGCAT 35813 ||||| || | || ||| || ||| | ||||| ||||||||||| || || || ||| Sbjct 98 TGGCCTGGCGAAATTCCAACTGTGTATCGTTGGCCGTATGATTACAGCAAGCCTGGTCAT 157 Query 35814 GACGAAGATTTTGTTCCTCAAAC 35836 |||||||| ||| | || || || Sbjct 158 GACGAAGACTTTATCCCGCAGAC 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150009648552280