Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq110395 122 8e-23 seq106734 111 1e-19 >seq110395 Length=10286 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| ||||| || || || || || || ||||| || ||| | || Sbjct 9756 ATGCAGATCTTCGTTAAGACGCTTACTGGGAAGACGATCACCCTCGAGGTCGAATCGTCC 9815 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| | ||| ||||| || || ||||| || || |||||||| Sbjct 9816 GATACCATCGACAACGTTAAGGCCAAA-ATCCAGGATAAGGAAGGCATCCCCCCCGATCA 9874 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||| | ||||| ||||| || ||||| ||||| | | | | | || || || || Sbjct 9875 ACAGCGTCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGGCGTACCCTCTCCGACTACAA 9934 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || || || ||||| | || | ||||| ||| Sbjct 9935 CATCCAGAAGGAGTCCACCCTCCATTTGGTCCTCCGTCTTCGCGGCGGC 9983 Score = 89.7 bits (98), Expect = 5e-13 Identities = 155/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || ||||| || || || || || || ||||| || || | || Sbjct 9984 ATGCAAATATTCGTCAAGACGCTCACTGGGAAGACCATCACCCTCGAGGTCGAGTCGTCC 10043 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || ||||| || Sbjct 10044 GACACCATCGATAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCCGACCAG 10103 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| ||||| || || ||| |||| || | | | || ||||| || Sbjct 10104 CAGCGCCTGATTTTTGCAGGCAAGCAGTTGGAAGACGGCCGCACGCTCTCCGATTACAAT 10163 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGT--GTTGCGATTG 24922 || || ||||||||||| || || |||||| ||||| |||| Sbjct 10164 ATCCAGAAGGAATCGACCCTCCATCTTGGTACGTTGC-ATTG 10204 >seq106734 Length=403 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || ||||| || || || || || ||||| || ||||| | | Sbjct 30 GATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACAATCACGCTGGAGGTAGAGTCTTC 89 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||| || ||||| ||||| || || ||||| || Sbjct 90 GGACACTATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGTATCCCCCCCGACCA 149 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| ||||||| ||||| || ||| ||||||| | | | | || || ||||| Sbjct 150 ACAACGTCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGGCGCACGCTCTCGGACTATAA 209 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 || || ||||| || || || || Sbjct 210 TATCCAGAAGGAGTCCACCCTTCA 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449272236712280