Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq110166 87.8 1e-12 >seq110166 Length=12944 Score = 87.8 bits (96), Expect = 1e-12 Identities = 176/261 (67%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 || |||||| ||||| ||||| | || | || | ||||||||| |||||| | Sbjct 11572 GACGAGCTCGGTCTCGGGGTTTTTGCAAGACTTGCAGAGCACAAACTTATCGATGAAGAC 11513 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| || || || | | || |||||||| |||||||| ||| | || ||||| Sbjct 11512 ATCGAGGAGCTCGCGAAGGCGTGTGGCGTCGTGGGCACCGTTGACAATGTAACGGTCGTT 11453 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 ||| | || || ||||| || || || ||||| |||||| | || || | ||| Sbjct 11452 TTTCTCGTCAACAGAGGTTTGGGCACCTAGTTCGCAACCGAAGAATTTGGTAGTGTAGGA 11393 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 || || || || || ||| | || | ||||||| || |||||||||||||| Sbjct 11392 GGGGGGGCGAGATAGAGCGCGGGCAACATCAGACATGTTGGGAATAACAGTCTTGATGCC 11333 Query 34551 GTTGCCCTTTCCTTCGACCTT 34571 ||||| || || |||| ||| Sbjct 11332 ATTGCCTTTGCCCTCGATCTT 11312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412282091390093