Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_022060.1 Length=54314 Score E Sequences producing significant alignments: (Bits) Value seq109371 206 9e-49 seq69633 95.1 4e-15 >seq109371 Length=32687 Score = 206 bits (228), Expect = 9e-49 Identities = 648/983 (66%), Gaps = 33/983 (3%) Strand=Plus/Plus Query 40953 GTCAACAACGACTGCGTTCACGAAACCGAGAGAATGGCAGACGATTCGGTGGATCTGATT 41012 |||||| |||||||||| || || ||| | | ||||| ||| || | ||| | Sbjct 22914 GTCAACGACGACTGCGTGCAGGAGACCCGGCGCATGGCGTCCGACAGCGTCGGCCTGGTC 22973 Query 41013 GTCACTAGCATTCCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGC 41072 | || ||||| || ||| || || ||||||||| |||||| || | ||||||||| Sbjct 22974 CTGACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCGAACTTCGCCGACTTCGGG 23033 Query 41073 CACACCGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTG 41132 |||||||| ||||| ||| |||| ||||||||||||||| ||| |||||||| Sbjct 23034 CACACCGATAGCAACGAGCACTTCTTCCAGCAGATGGACTACCTGGTGCCGGAGCTGCTG 23093 Query 41133 CGCATCCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTGTT---C 41189 ||| | || ||| ||| | | || |||||||||| |||||||| || | Sbjct 23094 CGCGTGCTGATGCCAGGCAGGGTGGCGGCGATCCACGTCAAGAACCGCATCGTGCCGAGC 23153 Query 41190 GGAAACGTCACCGGCGCCGGCGTGCCCACAGTGTCCCCGTTCCACGCCGAGGCGATCTTC 41249 || | ||| |||| ||| | | || | || ||||||| || || || | | Sbjct 23154 GGCATGGTCGAGGGCGTTGGCTTCCAGACCGAGTACCCGTTCGACATGGACACGCTGGCC 23213 Query 41250 CACGGCCGCAAACACGGCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGTG 41309 | ||| ||||||||| ||||| ||||| | || | |||| || ||||| Sbjct 23214 TGCTTTCGCCGGCACGGCTTCCACTACATCGGCCGCAAGCCCATCATCACGGACGTGGTC 23273 Query 41310 CGGGAAAACAACCAGACGTACCGGCTGGGCTGGTCGGAGCAGTGCAAAGACGCCACCAAG 41369 ||||| ||||||||||| ||| ||||||||||| ||||| ||||| |||| | | Sbjct 23274 CGGGAGAACAACCAGACCTACAGGCTGGGCTGGAGCGAGCAATGCAAGGACGGTAGCCGC 23333 Query 41370 ATGGGTGTCGGCTCCCCGGAATACATTCTGCTGTTCCACAAACCGCAAACAGACAGGTCG 41429 ||||| ||||| || ||| | ||||| |||| ||| ||| || ||| | | | Sbjct 23334 ATGGGCTTCGGCCTGTGCGAGTACCTGCTGCTCTTCCGCAAGGCGCCGACCGAC-GCTAG 23392 Query 41430 AAG-GGATACGCCGACACACCCGTCACCAAATCCAAGGACGAATACACCCGTGCCCGATG 41488 | || || |||||| ||| ||| ||| ||||| ||| ||| |||| | || || Sbjct 23393 CCGTGGCTATGCCGACCTACCGGTCTTCAAGGACAAGGCCGAGTACTCCCGCCCGCGCTG 23452 Query 41489 GCAGGTGGACGCGCACGCGTT---CTGGCGCTCGAGCGGCAACCGGTTACTGACCGCCGA 41545 |||| | || || |||| || | | ||||| ||| | || || ||||| |||| Sbjct 23453 GCAGCTCGATGCCCACGGCTTTGCCCGCAGCTCG---GGCGATCGCTTGCTGACGCCCGA 23509 Query 41546 CGAGCTCGCCGCACTG--CCAC-CAGACCAGTTGGCCTCACTGTTCACCAAGCACAGCCT 41602 || |||| || ||| |||| | ||| || | ||||| ||||||| | | Sbjct 23510 GGAACTCGACGGGCTGACCCACGCGGACATCTT---CAAGATGTTCCGCAAGCACTCCAT 23566 Query 41603 GAAGGACGTCTACGACTACCAGTCAC-ACGTCCGCATCGGTGAG--CAACTCGAAGGTCG 41659 | | || ||||||| | || ||| |||| |||||||||||| | || || || Sbjct 23567 GGAACGGGTGTACGACTTCGAG-CACGACGTGCGCATCGGTGAGGCCTTGGCGCAG--CG 23623 Query 41660 CGGTGCCCTGCCTGCTACGTTCATG--GCCATCGCCCCGGGATCGTGGTCACCTC-ACGT 41716 ||| ||||| | || |||||| || ||| | | || ||| |||| | |||| Sbjct 23624 CGGGATGCTGCCGACGACCTTCATGCTGCTGCAGCCGCAG--TCCTGG-CACCCCGACGT 23680 Query 41717 GTGGCACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAACGTCCA 41776 ||| |||| | | || ||| |||| | ||||| | ||| ||||| | | | Sbjct 23681 CTGGACCGACATCACGCGCATGCGCACCCTCAACGGTGCCCAG-TCGGCCGC-GGGCCGA 23738 Query 41777 AA--TGCATGTGTGCCCCCTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCG 41834 | ||| ||||||| ||||||||||||||| || || |||| | | | ||| Sbjct 23739 GACCAGCACCTGTGCCCGATGCAGTTCGACATCGCCGATCGCGCGATCGCCCAGTACTCC 23798 Query 41835 AATCCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCT 41894 | || ||| ||| | ||||| |||||||||||| || ||||| | || || Sbjct 23799 ATGAAGGGTGAGGAGGTCTATGACCCCTTCGGCGGGCTGATGACGGTGCCTTACCGCGCC 23858 Query 41895 CTGAAACTCGGTCGGCGCGGCCG 41917 || || || || ||||| || Sbjct 23859 GTGCTGCTGGGGCGCCGCGGACG 23881 >seq69633 Length=120 Score = 95.1 bits (104), Expect = 4e-15 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 41078 CGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCAT 41137 ||| || |||| ||||||||||| ||||||||| | ||| | ||||||||||||||||| Sbjct 120 CGATGATAACGAGCATTTCTGGGAGCAGATGGATTTCCTGATCCCGCAGCTGCTGCGCAT 61 Query 41138 CCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGA 41192 || ||||| || || ||| ||| ||| || ||||| |||||| || |||| Sbjct 60 TCTGGCGCCCGGGCGGATCGCGGCCATCCATGTGAAGGATCGCATCGTGCCCGGA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 173453849271912