Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_022066.1 Length=108297 Score E Sequences producing significant alignments: (Bits) Value seq108422 125 5e-24 seq108124 98.7 7e-16 seq12373 86.0 4e-12 >seq108422 Length=3279 Score = 125 bits (138), Expect = 5e-24 Identities = 239/344 (69%), Gaps = 11/344 (3%) Strand=Plus/Minus Query 95012 CGTCGGATACGAAAGCGCCCTGTATCCGGATGG-CACCCCGCGCCCCCACGGGCAGGAAT 95070 ||||| || || ||||| || | ||||||| || ||| || | ||||| | | Sbjct 2175 CGTCGCTGACAAAGGCGCCGTGCACGCGGATGGGCAGACCGGTGCCGGA-GGGCATGTAC 2117 Query 95071 AACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTA 95130 | | ||| ||||| |||| ||| |||||| || || ||| ||||| ||||| Sbjct 2116 AGCATGTCGCCCATGCCCAGCAGCGCCTCGGCACCCATCTGGTCGAGGATGGTGCGGCTG 2057 Query 95131 TCGGTGAGTGATGCTG---TGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGG 95187 ||| | || |||| ||| || || || | | ||| | ||||| ||||| ||| Sbjct 2056 TCGATCTTGGA-GCTGACCTGG--AAGGACAGGCGCGTCGGGATGTTGGCCTTGATGAGG 2000 Query 95188 CCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATACCGGCTGCG 95247 || |||| || ||||| || ||||||||||||||||||| || || || ||||| ||| Sbjct 1999 CCGGTGATGACGTCCACCGACGGCCGCTGCGTCGCCAGGATCAGGTGGATGCCGGCCGCG 1940 Query 95248 CGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATC 95307 ||||| ||||| || | |||| | || |||||| || |||||| | ||||| Sbjct 1939 CGCGCTTTCTGCGCCAGGCGGGCGATCAGCTCCTCGA--TC-TTCTTGCCAACCACCATC 1883 Query 95308 ATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGGAG 95351 || ||||| || || ||||||| || || |||||| |||| || Sbjct 1882 ATCAGGTCGGCCAGCTCGTCGATGACGACGACGATGAAGGGTAG 1839 >seq108124 Length=5758 Score = 98.7 bits (108), Expect = 7e-16 Identities = 112/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 95179 TTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATA 95238 ||||| ||||| || | || || || || ||||||||||||||||||| || || | Sbjct 147 TTGATCAGGCCGGTAATCACGTCGACCGATGGCCGCTGCGTCGCCAGGATCAGGTGCAGG 88 Query 95239 CCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAG 95298 ||||| |||||||||||||||||||| || | || |||||| | |||||| | Sbjct 87 CCGGCCGCGCGCGCCTTCTGGGCGATACGCGCGATCAACTCCTCGA---CCTTCTTGCCG 31 Query 95299 CCGCCCATCATGAGGTCTGCGAGTTCGTCG 95328 | ||||||| ||||| || || |||||| Sbjct 30 ACCACCATCATCAGGTCGGCCAGCTCGTCG 1 >seq12373 Length=2096 Score = 86.0 bits (94), Expect = 4e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 95476 AGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGC 95535 ||||| ||||| || | ||| || | || | ||| || |||||||||| ||| ||| Sbjct 7 AGGTGCGGGATGCCCTCGTAGACGGACATCTCGAGCATTTTGGGGTCGATCAGGATCAGC 66 Query 95536 TTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTG 95595 || | |||| || | || |||| || | | ||| ||||||| | Sbjct 67 CGCACATCGGCTGGATCGGATTTATACAGCAGCGACAAAATGGTCGCGTTGATGCCGACC 126 Query 95596 GACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAGGT 95650 ||||||||||| ||||||| ||| |||||||||||||| ||||| |||||||||| Sbjct 127 GACTTGCCCGAACCGGTGGTGCCGGCCACCAGCAGGTGCGGCATCTTGGCCAGGT 181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345956102483538