Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq108422 140 2e-28 seq108124 111 1e-19 seq24409 86.0 4e-12 seq12373 86.0 4e-12 >seq108422 Length=3279 Score = 140 bits (154), Expect = 2e-28 Identities = 242/344 (70%), Gaps = 11/344 (3%) Strand=Plus/Minus Query 95517 CGTCGGATACGAAAGCGCCCTGTATCCGGATGG-CACCCCGCGCCCCCACGGGCAGGAAT 95575 ||||| || || ||||| || | ||||||| || ||| || | ||||| | | Sbjct 2175 CGTCGCTGACAAAGGCGCCGTGCACGCGGATGGGCAGACCGGTGCCGGA-GGGCATGTAC 2117 Query 95576 AACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTCGTCCAGGATCACCCGGCTA 95635 | | ||| ||||| |||| ||| |||||| || || ||| ||||| ||||| Sbjct 2116 AGCATGTCGCCCATGCCCAGCAGCGCCTCGGCACCCATCTGGTCGAGGATGGTGCGGCTG 2057 Query 95636 TCGGTGAGTGATGCTG---TGGCGAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGG 95692 ||| | || |||| ||| || || || | | ||| | ||||| ||||| ||| Sbjct 2056 TCGATCTTGGA-GCTGACCTGG--AAGGACAGGCGCGTCGGGATGTTGGCCTTGATGAGG 2000 Query 95693 CCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCTGCG 95752 || |||| || ||||| || ||||||||||||||||||| || || |||||||| ||| Sbjct 1999 CCGGTGATGACGTCCACCGACGGCCGCTGCGTCGCCAGGATCAGGTGGATGCCGGCCGCG 1940 Query 95753 CGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATC 95812 ||||| ||||| || | |||| | || |||||| || |||||| | ||||| Sbjct 1939 CGCGCTTTCTGCGCCAGGCGGGCGATCAGCTCCTCGA--TC-TTCTTGCCAACCACCATC 1883 Query 95813 ATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGGAG 95856 || ||||| ||||||||||||| || || |||||| |||| || Sbjct 1882 ATCAGGTCGGCCAGCTCGTCGATGACGACGACGATGAAGGGTAG 1839 >seq108124 Length=5758 Score = 111 bits (122), Expect = 1e-19 Identities = 115/150 (77%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 95684 TTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATG 95743 ||||| ||||| || | || || || || ||||||||||||||||||| || || | | Sbjct 147 TTGATCAGGCCGGTAATCACGTCGACCGATGGCCGCTGCGTCGCCAGGATCAGGTGCAGG 88 Query 95744 CCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAG 95803 ||||| |||||||||||||||||||| || | || |||||| | |||||| | Sbjct 87 CCGGCCGCGCGCGCCTTCTGGGCGATACGCGCGATCAACTCCTCGA---CCTTCTTGCCG 31 Query 95804 CCGCCCATCATGAGGTCTGCCAGCTCGTCG 95833 | ||||||| ||||| |||||||||||| Sbjct 30 ACCACCATCATCAGGTCGGCCAGCTCGTCG 1 >seq24409 Length=2046 Score = 86.0 bits (94), Expect = 4e-12 Identities = 124/173 (72%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 95684 TTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATG 95743 ||||| ||| |||| ||||| ||||| |||||||||||||||| |||| || ||| Sbjct 399 TTGATCGTGCCGGTGATGACATCGACGGACGGCCGCTGCGTCGCCATCACGATGTGGATG 340 Query 95744 CCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAG 95803 ||||| ||||||||| ||||||| | || || | | |||| || | |||| | Sbjct 339 CCGGCCGCGCGCGCCATCTGGGCAAGCCGCTGGATTGCGCCTTCGA--TC-TCCTTGCCG 283 Query 95804 CCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGGAG 95856 | | | ||| || || |||| |||||||| | || ||||| ||||| || Sbjct 282 GCAACGAGCATAAGATCGGCCATTTCGTCGACGATGACGACGATATAGGGCAG 230 >seq12373 Length=2096 Score = 86.0 bits (94), Expect = 4e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 95981 AGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGC 96040 ||||| ||||| || | ||| || | || | ||| || |||||||||| ||| ||| Sbjct 7 AGGTGCGGGATGCCCTCGTAGACGGACATCTCGAGCATTTTGGGGTCGATCAGGATCAGC 66 Query 96041 TTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTG 96100 || | |||| || | || |||| || | | ||| ||||||| | Sbjct 67 CGCACATCGGCTGGATCGGATTTATACAGCAGCGACAAAATGGTCGCGTTGATGCCGACC 126 Query 96101 GACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAGGT 96155 ||||||||||| ||||||| ||| |||||||||||||| ||||| |||||||||| Sbjct 127 GACTTGCCCGAACCGGTGGTGCCGGCCACCAGCAGGTGCGGCATCTTGGCCAGGT 181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351270490320281