Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq66098 197 2e-45 seq108235 172 9e-38 seq29707 172 9e-38 seq66277 141 2e-28 seq20529 109 9e-19 seq66627 104 4e-17 >seq66098 Length=313 Score = 197 bits (218), Expect = 2e-45 Identities = 196/254 (77%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 35514 TCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGC 35573 ||||| |||||||| ||||||| ||| || |||||| ||||| | || ||| Sbjct 5 TCGTCGCTCTCGAAGAACAGCACCTGGGCGCAGCCTTCGCCAGCGTAAATTTTGGCGGGC 64 Query 35574 AGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGC 35633 || || ||||||||||| ||||| ||||||| ||||||||||| ||||| | ||| Sbjct 65 AGCGGCGTGGTGTTGCTGAATTCCAGCGTCACATAGCCTTCCCACTCGGGTTCGAACGGG 124 Query 35634 GTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGG 35693 ||||||||||||||||| || |||||||| |||||| || |||| || | || Sbjct 125 GTCACGTTGACGATGATGCCGCAGCGCGCATAGGTGGATTTGCCCAGGCAGATGGTCAGC 184 Query 35694 ACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGA 35753 || |||||||||||||||||||| ||||||||||| ||||| || ||||| |||||||| Sbjct 185 ACATTGCGCGGAATGCGGAAGTACTCGACCGTGCGGGCCAGTGCAAAGCTATTCGGCGGG 244 Query 35754 ATCAGGATGCTGTC 35767 || | | |||||| Sbjct 245 ATGATGCAGCTGTC 258 >seq108235 Length=15805 Score = 172 bits (190), Expect = 9e-38 Identities = 170/217 (78%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 35438 TCACGCTTTCGGACGGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCTTGTA 35497 ||| || || || | ||||| ||| ||| |||||||| || |||||||| |||||||| Sbjct 217 TCAGGCCTTGGGCAGCGTCACGCCCACCTGACCCTGGTACTTGCCGCCGCGGTCCTTGTA 158 Query 35498 CGAGATTTCGCAGTCCTCGTCACTCTCGAAAAACAGCATCTGCGCCACA-CCTTCGTTCG 35556 || |||||| ||||||| |||||||| ||||||| |||||| ||| |||||| || Sbjct 157 GCTGACCTCGCAGACCTCGTCGCTCTCGAAGAACAGCACCTGCGC-ACAGCCTTCGCCCG 99 Query 35557 CGTACACACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCC 35616 | || | || ||||| || ||||||||||||||||| ||||||| ||||||| Sbjct 98 CATAGATCTTGGCGGGCAGCGGCGTGGTGTTGCTGAACTCCAGCGTCACATAGCCTTCCC 39 Query 35617 ACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACC 35653 |||| || || | ||||||||||||||||||||| || Sbjct 38 ACTCGGGCTCGAACGGCGTCACGTTGACGATGATGCC 2 >seq29707 Length=3443 Score = 172 bits (190), Expect = 9e-38 Identities = 243/331 (73%), Gaps = 14/331 (4%) Strand=Plus/Minus Query 35630 CGGCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCAC 35689 ||||||||||||||||||||| || ||||| || || || || || | || ||| Sbjct 3443 CGGCGTCACGTTGACGATGATGCCGCAGCGTGCATACGTCGATTTGCCGAGGCAGACCGT 3384 Query 35690 GAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGG 35749 || || |||||||| |||||||||||||||| ||||||||| || |||||| || || Sbjct 3383 CAGCACATTGCGCGGGATGCGGAAGTATTCGATCGTGCGTGCGAGCGCGAAGGAATTGGG 3324 Query 35750 CGGAATCAGGATGCTGTCAGC---CTTAA--CCGGCTGCAGGCACTTGGGATCGAAGTTC 35804 ||| || ||||| | || | ||| | || | | ||| | || | |||||||||| Sbjct 3323 CGGGAT---GATGCAGACATCGCTCTTGATGTCGAC-GAAGG-AGTTCGAATCGAAGTTC 3269 Query 35805 TTCGGATCAACCACTGCGCTGTTGATGTTGGTGAAGACTTCCCACTCATCGGCAGCA-CG 35863 ||||| || || | | |||||||||||| ||||| || | |||| ||||| ||| || Sbjct 3268 TTCGGGTCGACGATGGTGCTGTTGATGTTCGTGAACACCTTGAACTCGTCGGC-GCAGCG 3210 Query 35864 CACGTCATAACCATACGACGAGTTGCCGTACGAGATAACGTGCTGACCGTCGATGTT-GC 35922 | || || || ||||||||| ||||||| ||||| | | || ||||| | ||| || Sbjct 3209 GATATCGTAGCCGTACGACGAGGTGCCGTAGGAGATGATCTTCTTGCCGTC-ACGTTCGC 3151 Query 35923 GCACTTGCGACTCTTGAAAGGGTTCGATCAT 35953 |||| ||| | || || ||||||||||| Sbjct 3150 GCACCTGCTCCGGTTCGAACGGTTCGATCAT 3120 >seq66277 Length=193 Score = 141 bits (156), Expect = 2e-28 Identities = 118/144 (82%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 35630 CGGCGTCACGTTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCAC 35689 ||||||||||||||||||||| || ||||| || ||||||||||| |||| || | | Sbjct 1 CGGCGTCACGTTGACGATGATGCCGCAGCGGGCATAGGTGCTCTTGCCCAGGCAGATCGT 60 Query 35690 GAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGG 35749 || ||||||||||| ||||||||||| ||||| ||||| ||||| ||||||||||| || Sbjct 61 CAGCACGTTGCGCGGGATGCGGAAGTACTCGACGGTGCGGGCCAGCGCGAAGCTGTTGGG 120 Query 35750 CGGAATCAGGATGCTGTCAGCCTT 35773 ||| || ||||| | || |||| Sbjct 121 CGGGAT---GATGCAGACATCCTT 141 >seq20529 Length=145 Score = 109 bits (120), Expect = 9e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 35514 TCGTCACTCTCGAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGC 35573 ||||| |||||||| ||||||| |||||| |||||| ||||| | |||||| Sbjct 141 TCGTCGCTCTCGAAGAACAGCACCTGCGCGCAGCCTTCGCCGGCGTAGATCTTGGCCGGC 82 Query 35574 AGGTTGGTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGC 35633 || || |||||| ||| || || ||||||| ||||||||||| ||||| | |||| Sbjct 81 AGCGGCGTGGTGTTGGAGAATTCGAGCGTCACATAGCCTTCCCACTCCGGTTCGAACGGC 22 Query 35634 GTCACGTTGACGATGATACC 35653 ||||||||||||||||| || Sbjct 21 GTCACGTTGACGATGATGCC 2 >seq66627 Length=5492 Score = 104 bits (114), Expect = 4e-17 Identities = 83/100 (83%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 35434 GGCGTCACGCTTTCGGACGGGTCACACCCGTCTGGCCCTGGTATTTACCGCCGCGATCCT 35493 ||| ||| | |||||| | ||||| || ||||||||||||||| |||||||| |||| Sbjct 100 GGCCTCAGGTTTTCGGCAGCGTCACGCCGTGCTGGCCCTGGTATTTGCCGCCGCGGTCCT 41 Query 35494 TGTACGAGATTTCGCAGTCCTCGTCACTCTCGAAAAACAG 35533 |||||||| |||||||| | ||||| |||||||| ||||| Sbjct 40 TGTACGAGGTTTCGCAGACTTCGTCGCTCTCGAAGAACAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 824768765324040