Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq106734 123 2e-23 seq110395 100 2e-16 seq70823 86.0 4e-12 >seq106734 Length=403 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || |||| |||| ||||||||| || ||||||||||| || ||||| | || |||| Sbjct 236 AGATGAAGGGTGGACTCCTTCTGGATATTATAGTCCGAGAGCGTGCGCCCGTCCTCCAAC 177 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| |||||||||||||| ||||| ||||| | || | || |||||||| | || Sbjct 176 TGCTTGCCGGCGAAGATCAGACGTTGTTGGTCGGGGGGGATACCTTCCTTGTCCTGAATC 117 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | || | || | ||| || || | || || ||||| ||| Sbjct 116 TTGGCCTTGACGTTGTCGATAGTGTCCGAAGACTCTACCTCCAGCGTGATTGTCTTGCCC 57 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| |||||||||||||| Sbjct 56 GTGAGCGTCTTCACAAAGATCTGCAT 31 >seq110395 Length=10286 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 10/218 (5%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| || | |||| ||||||||| ||||| ||||| || ||| | ||| | || Sbjct 9967 AGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCC 9908 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || || || || | || | || ||||| || Sbjct 9907 TCGAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCTTCCTTATCC 9848 Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | ||||| || ||| |||| ||||| || ||||| || | ||| | Sbjct 9847 TGGATTTTGGCCTTAACGTTGTCGATGGTATCGGACGAT-----TCGACCTCGAGGGTGA 9793 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | ||||| || || || ||||| || |||||||||||| Sbjct 9792 TCGTCTTCCCAGTAAGCGTCTTAACGAAGATCTGCATG 9755 >seq70823 Length=785 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| ||| ||||||||||| || || || || ||| |||| Sbjct 331 AGGACCAAGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCTGAAAGAGTGCAGCCATCC 272 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 | || ||||| || || ||||| || | |||||||| | || | || ||||||| Sbjct 271 TGAAGCTGCTTGCCAGCAAAGATGAGACACTGCTGGTCAGGAGGGATGCCTTCCTTGTTC 212 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||| || | || | ||| | | ||| || || | || || ||| Sbjct 211 TGAATCTTGGCTTTCACATTGCCAATGGTATCAGTTGGCTCAACCTCTAATGTAATAGTC 152 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| ||||| ||||| || Sbjct 151 TTCCCTGTGAGGGTCTTGACAAATATCTGTAT 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325251400863419