Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_023502.1 Length=109558 Score E Sequences producing significant alignments: (Bits) Value seq107653 140 2e-28 seq98720 107 1e-18 >seq107653 Length=176415 Score = 140 bits (154), Expect = 2e-28 Identities = 224/318 (70%), Gaps = 9/318 (3%) Strand=Plus/Plus Query 7342 TACCTAGAACTGGCGGGCGCTCCCGAGTGGACGACCGACACGGAGAACGGCAG---CGAG 7398 ||||| || | | ||| || ||||| ||| | |||||||| || ||| | |||| Sbjct 66316 TACCTGGAGCACGTGGGAGCCCCCGACTGGTCCACCGACACCGACGACGACTCGGCCGAG 66375 Query 7399 ATCATCGCCGAAGTGGCTGGCCGCTCCTGCTATCGCAGCTTCAAGGAAGGGCTCAACCCG 7458 | |||| || | || ||||| |||||||| | ||| || || |||||| | Sbjct 66376 CTGATCGA-GA--TCGCCGGCCGATCCTGCTACAGGTCGTTCGGGGCGGGACTCAACAAG 66432 Query 7459 AACGTCACCCGCGTCCGCGAGGGCAACGAGCAGTACCTTGGCAAT---ATCGCCAAGCAG 7515 ||||| ||||| |||||||||||||||||| | ||| | || || ||| | ||| Sbjct 66433 AACGTGACCCGTGTCCGCGAGGGCAACGAGAACTACGTCGGGAACTCGATCCTCGCCCAG 66492 Query 7516 AAGCACGGCTCGGTATTCGAGCACGGCAGCGCCACGCTTGCCTTCTTCGACGTGTCGCGC 7575 |||||||| ||||| ||||||||| | || ||| | || ||| |||||||| | Sbjct 66493 AAGCACGGGTCGGTCCTCGAGCACGCCTACGACACCTTCGCGATCTGTGACGTGTCCAGG 66552 Query 7576 ATCGTCACCCACGAGCTTGTCCGGCACCGGCCCGGCATGGCTTACTCGCAGGAGAGCCTT 7635 ||||| ||||||||||| || || ||||| | || | ||| | ||| |||||| | Sbjct 66553 ATCGTGACCCACGAGCTGGTTCGCCACCGACAGGGGACGGCCTTCTCCCAGGAGTCGGGT 66612 Query 7636 CGCTTCGTCCGGCTCGAC 7653 |||||| ||||| | ||| Sbjct 66613 CGCTTCATCCGGGTGGAC 66630 >seq98720 Length=1731 Score = 107 bits (118), Expect = 1e-18 Identities = 176/251 (70%), Gaps = 11/251 (4%) Strand=Plus/Minus Query 26881 GCATCCTTGGCGCTGATGGCAAGCGCCTGCCGAACTACCAGAACGGCCAATACTTC-CGC 26939 |||| | ||||| || || || | | ||||||||||||| | | ||||| || Sbjct 1724 GCATTATCGGCGCGGACGGGAAACCGATCCCGAACTACCAGAGCCCGGAGAACTTCTCGA 1665 Query 26940 CAGTACGAGCAGCTTGCTCAGACCGCGAAGCAGGTGCAGATGGAACGCTTCCCCGAGATG 26999 | ||||| |||| || || |||| || | |||||||| | |||| | || Sbjct 1664 CC-TACGAAAAGCTGGCCAAGGACGCGCGCCAAATCCAGATGGAGAAATACCCCCAACTG 1606 Query 27000 AACGATCAGTTCCGCTGGGGTGGCTACTTCGGCGGTCCGAAGGGCAAGTACGGCGCGATG 27059 || |||||||||||||| ||||| |||||||| |||||||||||||| || |||||| Sbjct 1605 GCGGACCAGTTCCGCTGGGGCGGCTATTTCGGCGGGCCGAAGGGCAAGTATGGGGCGATG 1546 Query 27060 GACGCCATGCACTTCGACACGGGCGG-----CAA----GAACATGGCGGGCGGCTCTTGG 27110 ||| |||||||||||| ||| || ||| |||||| ||||| |||||| Sbjct 1545 GACCTCATGCACTTCGATCTGGGGGGCGGTCCAAATCTCGGCATGGCCGGCGGGTCTTGG 1486 Query 27111 GCCAACGGCCT 27121 | ||| || || Sbjct 1485 GACAAAGGGCT 1475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 349985833729559