Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_023566.1 Length=56024 Score E Sequences producing significant alignments: (Bits) Value seq16606 93.3 2e-14 >seq16606 Length=39903 Score = 93.3 bits (102), Expect = 2e-14 Identities = 208/311 (67%), Gaps = 1/311 (0%) Strand=Plus/Minus Query 29797 GCGAA-AAGCTTATCGCCTATCAAGACACGCGCGGAATTTGGACAATAGGCGTTGGCCAT 29855 ||||| ||||||| ||| || || || |||| | ||||| ||||| |||| ||| Sbjct 10156 GCGAACAAGCTTACCGCGTACCAGGATGGCGGCGGCGTCTGGACCATAGGTATTGGACAT 10097 Query 29856 ACGTCTGCGGCTGGTGAACCGACTGTGAAGAAGGGAATGCGTATTACCGCCACGCAATCC 29915 |||||||| ||||| ||| || |||||||| ||| || || || | ||||| Sbjct 10096 ACGTCTGCTGCTGGACCACCCGTCGTAAAGAAGGGCATGAAGATCACAGCAGCCCAATCG 10037 Query 29916 GATGAAATTCTAGCGCGTGACTTGCGCGACGTTGAAGACGTAATCAATTCAGCGGTCAAA 29975 ||| ||||| || | || || |||||||| ||| ||||| || ||| || Sbjct 10036 GATAGTATTCTTGCAAGCGATCTGGCAGACGTTGAGAACGACATCAACACAATGGTGAAG 9977 Query 29976 GTGCCGTTGACGCAAAATCAGTTTGACGCGCTCACATCGCTCATTCTGAATATCGGCGGA 30035 ||| || | | || ||| || ||||| || ||| | | || || |||||||| Sbjct 9976 GTGACGCTTAACCAGTCTCAATTCGACGCTCTTGGGTCGTTTGTCCTTAACATCGGCGGC 9917 Query 30036 ACCGCATTCAAGAAATCAACACTCTTGAAAAAGCTGAACGCGAAGGATTACAGCGGTGCG 30095 |||| ||| || ||||| || ||| ||| ||||| || ||||| ||| ||| Sbjct 9916 CCCGCTTTCCGCAAGTCAACTTTCCTGAGAAAACTGAATGCAGGAGATTATGCCGGCGCG 9857 Query 30096 GCTGATCAATT 30106 ||| | || || Sbjct 9856 GCTAACCAGTT 9846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 178918623430932