Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_023572.1 Length=42240 Score E Sequences producing significant alignments: (Bits) Value seq109454 111 4e-20 seq109371 107 5e-19 seq81106 84.2 6e-12 >seq109454 Length=55839 Score = 111 bits (122), Expect = 4e-20 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 36960 ACTGGGTGATCGTCGGCGGTGAATCCGGGCCCGGCGCCCGGCCAATGCACCCCGATTGGG 37019 ||||||||||| |||||| ||| ||| | | ||| ||||| |||| ||||| |||| Sbjct 47887 ACTGGGTGATCTGCGGCGGCGAAAGCGGCCACCACGCGCGGCCGATGCTCCCCGCCTGGG 47946 Query 37020 CGCGAACGCTGCGCGACCAGTGCACGGTGGCCGGTGTGCCGTTCCTGTTCAAGCAGTGGG 37079 | ||| ||||||||||||||| || ||||| |||||||||||||||||||| |||| Sbjct 47947 CCCGAGACCTGCGCGACCAGTGCGAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAATGGG 48006 Query 37080 G 37080 | Sbjct 48007 G 48007 >seq109371 Length=32687 Score = 107 bits (118), Expect = 5e-19 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 36952 CGGCATCGACTGGGTGATCGTCGGCGGTGAATCCGGGCCCGGCGCCCGGCCAATGCACCC 37011 |||||| ||||| | |||||||| || || |||||| ||||| || || |||||||| Sbjct 5641 CGGCATTCACTGGATCATCGTCGGAGGCGAGAGCGGGCCTGGCGCGCGTCCGATGCACCC 5582 Query 37012 CGATTGGGCGCGAACGCTGCGCGACCAGTGCACGGTGGCCGGTGTGCCGTTCCTGTTCAA 37071 | ||||| || | ||||||||||||||| ||| |||| | ||| |||| | ||||| Sbjct 5581 CAGCTGGGCCCGCGCCCTGCGCGACCAGTGCGCGGCGGCCAGCGTGGCGTTTCACTTCAA 5522 Query 37072 GCAGTGGGG 37080 ||||||||| Sbjct 5521 GCAGTGGGG 5513 >seq81106 Length=13242 Score = 84.2 bits (92), Expect = 6e-12 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 36957 TCGACTGGGTGATCGTCGGCGGTGAATCCGGGCCCGGCGCCCGGCCAATGCACCCCGATT 37016 |||||||||| ||| ||||| || ||| ||| || || || |||||||| | | Sbjct 8759 TCGACTGGGTCATCTGTGGCGGCGAGAGCGGCCCCAAGGCGCGTCCGATGCACCCGGCAT 8818 Query 37017 GGGCGCGAACGCTGCGCGACCAGTGCACGGTGGCCGGTGTGCCGTTCCTGTTCAAGCAGT 37076 |||| ||| || ||||| |||||| ||| ||| ||||||||| |||||||||||| Sbjct 8819 GGGCCCGAGGCCTCCGCGATCAGTGCGCGGCCGCCAAGGTGCCGTTCTTGTTCAAGCAGT 8878 Query 37077 GGGG 37080 |||| Sbjct 8879 GGGG 8882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134868069625124