Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_023580.1 Length=57775 Score E Sequences producing significant alignments: (Bits) Value seq109371 150 7e-32 seq69633 89.7 2e-13 >seq109371 Length=32687 Score = 150 bits (166), Expect = 7e-32 Identities = 636/984 (65%), Gaps = 39/984 (4%) Strand=Plus/Plus Query 45244 CAACAACGACTGCGTACCCGAAACCGAGTCGATGGA---CGACAACTCGGTGGACCTGAT 45300 |||| |||||||||| | || ||| | |||| ||||| | || | |||| | Sbjct 22916 CAACGACGACTGCGTGCAGGAGACCCGGCGCATGGCGTCCGACAGC---GTCGGCCTGGT 22972 Query 45301 CGTCACCAGTATTCCGTTCTCCAATCACTACGAATACACCCCGTCCTACAACGACTTCGG 45360 | | ||||| || || ||| || || ||||| ||| | ||| || | ||||||||| Sbjct 22973 CCTGACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCGAACTTCGCCGACTTCGG 23032 Query 45361 TCACACCGACGACAACGCGCATTTCTGGGCGCAAATGGACTACCTCACACCGCAACTGTT 45420 |||||||| ||||| ||| |||| ||| ||||||||||| ||| | ||| | Sbjct 23033 GCACACCGATAGCAACGAGCACTTCTTCCAGCAGATGGACTACCTGGTGCCGGAGCTGCT 23092 Query 45421 GCGCATCCTTGCGCCCGGGCGGATCTACGCCTGCCACGTCAAAGACCGCATCTTGTT--- 45477 |||| | || ||| || || | || ||||||||| |||||||| || Sbjct 23093 GCGCGTGCTGATGCCAGGCAGGGTGGCGGCGATCCACGTCAAGAACCGCATCGTGCCGAG 23152 Query 45478 CGGCAATGTCACCGGCGCTGGCGTGCCCACCGTGTCACCATTTCACGCCGAAGCGATCTT 45537 ||||| ||| |||| |||| | | |||| || || || || || || | Sbjct 23153 CGGCATGGTCGAGGGCGTTGGCTTCCAGACCGAGTACCCGTTCGACATGGACACGCTGGC 23212 Query 45538 CCACGGCCGCAAACACGGCTTTGACTACCTCGGCATGATCACCGTTGTCACCGATGTGGT 45597 | | ||| |||||||| ||||| ||||| | || | |||| || ||||| Sbjct 23213 CTGCTTTCGCCGGCACGGCTTCCACTACATCGGCCGCAAGCCCATCATCACGGACGTGGT 23272 Query 45598 ACGGGAAAACAACCAGACGTACCGGTTGGGTTGGTCCGAGCAGTGCAAAGACGCCACCAA 45657 ||||| ||||||||||| ||| || |||| ||| |||||| ||||| |||| | | Sbjct 23273 CCGGGAGAACAACCAGACCTACAGGCTGGGCTGGAGCGAGCAATGCAAGGACGGTAGCCG 23332 Query 45658 GATGGGCGTTGGCTCCCCGGAATACGTTCTGCTGTTCCATAAACCGCAGACAGACAGATC 45717 |||||| | ||| || ||| | ||||| |||| || ||| ||| ||| | | Sbjct 23333 CATGGGCTTCGGCCTGTGCGAGTACCTGCTGCTCTTCCGCAAGGCGCCGACCGAC-GCTA 23391 Query 45718 GAAG-GGATACGCCGACACCCCCGTCACCAAATCCAAGGACGACTACACCCGTGCCCGCT 45776 | | || || |||||| || ||| ||| ||||| ||| ||| |||| | |||| Sbjct 23392 GCCGTGGCTATGCCGACCTACCGGTCTTCAAGGACAAGGCCGAGTACTCCCGCCCGCGCT 23451 Query 45777 GGCAGGTGGACGCGCACGCGTT---CTGGCGCTCGAGCGGCAACAGGACACTGACAGCCG 45833 ||||| | || || |||| || | | ||||| ||| | | ||||| ||| Sbjct 23452 GGCAGCTCGATGCCCACGGCTTTGCCCGCAGCTCG---GGCGATCGCTTGCTGACGCCCG 23508 Query 45834 ACGAGCTCGCCGCGATG--CCACCAGACCAGCTGGCCTCA--CTGTTCACCAAGCACAGC 45889 | || |||| || | || |||| | || || ||| ||||| ||||||| | Sbjct 23509 AGGAACTCGACGGGCTGACCCACGCGGACATCT----TCAAGATGTTCCGCAAGCACTCC 23564 Query 45890 CTGCAGGACGTCTACGACTACCAGTCAC-ACGTCCGCATCGGTGAG--CAACTCGAAGGT 45946 || | || ||||||| | || ||| |||| |||||||||||| | || || Sbjct 23565 ATGGAACGGGTGTACGACTTCGAG-CACGACGTGCGCATCGGTGAGGCCTTGGCGCAG-- 23621 Query 45947 CGCGGCGCCCTGCCTGCCACGTTCATG--GCCATCGCCCCGGGATCGTGGTCACCTC-AC 46003 ||||| ||||| | || |||||| || ||| | | || ||| |||| | || Sbjct 23622 CGCGGGATGCTGCCGACGACCTTCATGCTGCTGCAGCCGCAG--TCCTGG-CACCCCGAC 23678 Query 46004 GTGTGGCACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGC-AACGT 46062 || ||| |||| | | || ||| |||| | ||||| | ||| ||||| | Sbjct 23679 GTCTGGACCGACATCACGCGCATGCGCACCCTCAACGGTGCCCAG-TCGGCCGCGGGCCG 23737 Query 46063 TCAAATGCACGTGTGCCCCCTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTC 46122 | |||| ||||||| ||||||||||||||| || || |||| | | | ||| Sbjct 23738 AGACCAGCACCTGTGCCCGATGCAGTTCGACATCGCCGATCGCGCGATCGCCCAGTACTC 23797 Query 46123 GAATCCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGC 46182 | || ||| ||| | ||||| |||||||||||| || ||||| | || || Sbjct 23798 CATGAAGGGTGAGGAGGTCTATGACCCCTTCGGCGGGCTGATGACGGTGCCTTACCGCGC 23857 Query 46183 TCTGAAACTCGGTCGGCGCGGCCG 46206 || || || || ||||| || Sbjct 23858 CGTGCTGCTGGGGCGCCGCGGACG 23881 >seq69633 Length=120 Score = 89.7 bits (98), Expect = 2e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 45367 CGACGACAACGCGCATTTCTGGGCGCAAATGGACTACCTCACACCGCAACTGTTGCGCAT 45426 ||| || |||| ||||||||||| ||| ||||| | ||| | ||||| ||| ||||||| Sbjct 120 CGATGATAACGAGCATTTCTGGGAGCAGATGGATTTCCTGATCCCGCAGCTGCTGCGCAT 61 Query 45427 CCTTGCGCCCGGGCGGATCTACGCCTGCCACGTCAAAGACCGCATCTTG 45475 || ||||||||||||||| ||| ||| || || || |||||| || Sbjct 60 TCTGGCGCCCGGGCGGATCGCGGCCATCCATGTGAAGGATCGCATCGTG 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184514424338794