Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_023600.1 Length=71058 Score E Sequences producing significant alignments: (Bits) Value seq109290 93.3 2e-14 >seq109290 Length=7648 Score = 93.3 bits (102), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 39114 CTGGTCTACACCGAGGAGATCGCCAGCGGCGCGGCCTACGAGGGCCGGTGCGAGGGCCTG 39173 ||| | ||| | ||||| | ||||||||| |||||||||||||| ||| ||| Sbjct 7225 CTGCTGTACGCAGAGGAACTGGCCAGCGGCAGCGCCTACGAGGGCCGCACCGA---CCTC 7281 Query 39174 GGCAACTGCCAGCCCGGCGACGGTGTGAGGTTCAAGGGCCGGTCGTTTATGCAGGTCACG 39233 |||||| |||||||||||||||| ||| | ||||||||||| | || ||| |||| Sbjct 7282 GGCAACAGCCAGCCCGGCGACGGCGTGCGCTTCAAGGGCCGCGGCCTGATCCAGCTCACC 7341 Query 39234 GGCCGATCCAACTAC 39248 ||||| ||||||| Sbjct 7342 GGCCGCAACAACTAC 7356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 226952802031059