Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq109193 190 7e-43 seq2347 127 7e-24 seq33915 111 5e-19 seq108829 91.5 5e-13 seq17748 86.0 2e-11 >seq109193 Length=1357 Score = 190 bits (210), Expect = 7e-43 Identities = 317/455 (70%), Gaps = 6/455 (1%) Strand=Plus/Minus Query 188740 GATGGAGTAAAGATCAAAAAATCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAA 188799 |||| ||| |||| ||||||| || || | | |||||| || ||| | |||||| Sbjct 1062 GATGATGTAGAGATTGAAAAATCGAACATTGTAATGGTTGGCGAAACCGGTACCGGTAAA 1003 Query 188800 ACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCA 188859 || ||| | || |||| | || | || ||| | || || | ||||| ||||| Sbjct 1002 ACTTTACTGGCCAAAACCATTGCCAAAATATTAAACGTTCCGTTTTGTATCTGCGATGCT 943 Query 188860 ACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTT---CGT 188916 || ||||| ||||| ||||||||||| || ||||| |||| |||| ||| || Sbjct 942 ACCGTATTAACCGAAGCAGGTTATGTAGGCGAGGATGTTGAAA--GTATC-CTTACCCGC 886 Query 188917 TTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGAT 188976 ||| | ||| || || |||||| | || ||| || ||||| ||||| ||| Sbjct 885 TTATTACAAAGCGCCGACTACGATGTTACCGCTGCCGAAAAAGGCATTGTTTATATTGAT 826 Query 188977 GAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGC 189036 || || ||||||||||| | ||| || | | | || |||||||| |||||| ||| Sbjct 825 GAGGTTGATAAAATTGCCCGTAAAAGCGATAACGCTTCTATTACCCGTGATGTAAGCGGC 766 Query 189037 GAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCT 189096 ||||| ||||| || || |||||||| || | |||||||| | | ||| || || || Sbjct 765 GAAGGCGTACAACAGGCATTATTAAAGATACTGGAAGGTACCATGGTGAACGTACCACCA 706 Query 189097 CAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATCTTG 189156 |||||||||||||| ||||| | ||| ||||| | | |||| | || ||| || Sbjct 705 CAAGGTGGTCGTAAGCACCCCGATCAAAAAATGATCACGGTGAATACCAGCAACATCCTG 646 Query 189157 TTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAA 189191 |||||| ||||| |||||||||||| | || || Sbjct 645 TTTATTTGCGGTGGCGCGTTTGATGGTATCGACAA 611 >seq2347 Length=476 Score = 127 bits (140), Expect = 7e-24 Identities = 267/394 (68%), Gaps = 8/394 (2%) Strand=Plus/Plus Query 188740 GATGGAGTAAAGATCAAAAAATCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAA 188799 |||| ||| ||||| ||||||| || | | | || || |||||| |||||||| Sbjct 85 GATGATGTAGAGATCGAAAAATCAAACATCGTAATGGTGGGAGAGACTGGTACAGGTAAA 144 Query 188800 ACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCA 188859 || | | || |||| | ||| | || | |||| ||| | ||| | || || Sbjct 145 ACCCTGCTGGCCAAAACCATCGCTAAGATACTGAATGTTCCTTTCTGTATTTGCGACGCT 204 Query 188860 ACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTAT--TGCTTCGTT 188917 ||| || || ||||| ||||||||||| || |||||||||| |||| | ||| Sbjct 205 ACTGTATTGACGGAAGCAGGTTATGTAGGCGAGGATGTGGAAA--GTATCCTAACTCGCC 262 Query 188918 TAATCCAAGCAGCTGATTACGATATCGAATTA--GCGGAACGTGGAATTGTATATATCGA 188975 | | ||| || |||||||| | || | || ||| || || || ||||| || Sbjct 263 TGCTGCAAAGTGCCGATTACGACGT--AACTGCTGCCGAAAAAGGTATCGTTTATATTGA 320 Query 188976 TGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGG 189035 ||| || ||||||||||| | ||| || | | | || ||||| |||||||| || Sbjct 321 TGAGGTGGATAAAATTGCCCGCAAAAGCGATAACGCGAGTATCACCCGTGATGTATCGGG 380 Query 189036 CGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCC 189095 ||| || |||||||||||||| | ||||| | ||||| || | | ||| || || || Sbjct 381 CGAGGGTGTACAGCAAGCTTTGCTGAAAATACTGGAAGGCACTATGGTGAACGTACCACC 440 Query 189096 TCAAGGTGGTCGTAAACACCCTCACCAAGAAATG 189129 ||| || || || |||||||| | || ||||| Sbjct 441 TCAGGGCGGGCGCAAACACCCCGATCAGAAAATG 474 >seq33915 Length=1256 Score = 111 bits (122), Expect = 5e-19 Identities = 233/345 (68%), Gaps = 2/345 (1%) Strand=Plus/Plus Query 188764 AATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCT 188823 ||| |||| || | || || || || || || || || || | || ||||| |||| Sbjct 913 AATATTCTCTTGATCGGTCCCACGGGATCCGGGAAGACCTTGCTGGCGCAAACGCTGGCG 972 Query 188824 GATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTAT 188883 ||| | | || || | | || ||||||| || | | || ||||| ||||| Sbjct 973 CGCATGCTGGACGTGCCGTTTGTGATGGCTGATGCGACCACACTGACCGAAGCCGGTTAC 1032 Query 188884 GTAGGTGAAGATGTGGAAAACGTATTG-CTTCGTTTAATCCAAGCAGCTGATTACGATAT 188942 ||||| ||||| ||||||||| | || | | | | |||| || ||||||| | Sbjct 1033 GTAGGCGAAGACGTGGAAAACATCGTGGCCAAGCTGCTGCAAAGCTGCA-ATTACGAAGT 1091 Query 188943 CGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATC 189002 || || | || || || || |||||||| ||| | || || ||| | | ||||| Sbjct 1092 TGAGCGGGCTCAGCGCGGCATCGTGTATATCGACGAAATCGACAAGATTTCGCGCAAATC 1151 Query 189003 AGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAA 189062 || | | | ||||||||||| ||||| ||||||||||| || ||||| || || || || Sbjct 1152 GGACAACCCCTCCATTACCCGGGATGTTTCTGGCGAAGGCGTGCAGCAGGCCTTGTTGAA 1211 Query 189063 AATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCG 189107 |||| |||||||| | || | || || || ||||| || || Sbjct 1212 GCTCATCGAAGGTACGATGGCCAGCGTGCCACCGCAAGGGGGGCG 1256 >seq108829 Length=6477 Score = 91.5 bits (100), Expect = 5e-13 Identities = 220/333 (66%), Gaps = 0/333 (0%) Strand=Plus/Minus Query 188866 TTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAA 188925 || || ||||| || || || |||||||| || || ||| | | || | | || Sbjct 1441 TTGACGGAAGCCGGCTACGTCGGTGAAGACGTCGAGAACATCATCCTGAAGCTCTTGCAG 1382 Query 188926 GCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGAT 188985 || || || ||| | |||| ||| | || || || || || ||||||||||| || Sbjct 1381 GCGGCCGACTACAACGTCGAGCGCGCGCAGCGCGGTATCGTCTACATCGATGAAGTCGAC 1322 Query 188986 AAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTA 189045 || || | || || || | | || ||||| || || || ||||||||||| || Sbjct 1321 AAGATCAGCCGCAAGTCGGACAATCCGTCGATTACGCGCGACGTGTCTGGCGAAGGCGTG 1262 Query 189046 CAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGT 189105 ||||| || | | || ||||| ||||| || || || || || || || ||||| Sbjct 1261 CAGCAGGCGCTCCTGAAGATCATGGAAGGAACGGTCGCATCTGTGCCGCCGCAGGGTGGC 1202 Query 189106 CGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTT 189165 || || || || || || || | || | | ||||| || || ||| |||| || Sbjct 1201 CGCAAGCATCCGCAGCAGGAGTTCCTGCAGGTGGATACGACCAACATCCTGTTCATCTGC 1142 Query 189166 GGTGGAGCGTTTGATGGTCTTGAAAACATTATC 189198 || || || || | |||||| ||||| || ||| Sbjct 1141 GGCGGTGCTTTCGCTGGTCTCGAAAAGATCATC 1109 >seq17748 Length=1219 Score = 86.0 bits (94), Expect = 2e-11 Identities = 202/305 (66%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 69514 ATTGCTGGTAATGTTGGTACACCTGAAGCTGTTCGTGAACTTGAAAATGCAGGCGCAGAT 69573 || || || ||||| || || || |||||||| || || |||| || ||||| Sbjct 1013 ATCGCCGGCAATGTGGGCACGCCCGAAGCTGTGATCGACCTGGAAAGCTGGGGTGCAGAC 954 Query 69574 GCTACAAAAGTTGGTATTGGCCCAGGTAAAGTATGTATTACTAAAATCAAAACTGGTTTT 69633 || || || || || || ||||| || ||||| || || || | || ||||| ||| Sbjct 953 GCAACCAAGGTGGGCATAGGCCCGGGCAAAGTCTGCATCACACGGCTGAAGACTGGCTTT 894 Query 69634 GGTACTGGCGGCTGGCAGTTAGCTGCATTGCGTTGGTGTTCAAAAGTAGCTACTAAACCA 69693 || || |||||||||||| | | || || |||||| | || || || ||||| Sbjct 893 GGCACCGGCGGCTGGCAGCTGTCAGCCCTGAAGTGGTGTGCCCGTGTGGCCACCAAACCC 834 Query 69694 ATAATTGCTGATGGTGGTATTCGTACTAACGGTGATATTGCTAAATCTGTACGTTTTGGC 69753 || ||||| || || || || || | || || || || ||||| | || || ||| Sbjct 833 ATCATTGCCGACGGCGGCATCCGCGAGCATGGCGACATCGCCAAATCCATCCGCTTCGGC 774 Query 69754 GCTTCAATGGTTATGATTGGTTCGCTATTTGCGGGTCACGAGGAATCACCAGGTGAGACG 69813 || ||||| ||| | || || | | || || || || || || || || ||||| Sbjct 773 GCCAGCATGGTCATGGTCGGCTCAATGCTGGCTGGCCATGAAGAGTCTCCCGGCCAGACG 714 Query 69814 ATAGA 69818 |||| Sbjct 713 GTAGA 709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1589642305261248