Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_023725.1 Length=156646 Score E Sequences producing significant alignments: (Bits) Value seq111115 82.4 8e-11 seq108213 82.4 8e-11 >seq111115 Length=66179 Score = 82.4 bits (90), Expect = 8e-11 Identities = 164/235 (70%), Gaps = 10/235 (4%) Strand=Plus/Minus Query 152462 TGCGCGAG-GTGGTGATCAGCGACGAGCACCCCAACCCGACGCCGATCGCCATCGTGCTC 152520 |||||||| | | || |||| ||| ||||| ||| || | |||| | ||| ||| Sbjct 40214 TGCGCGAGTGCCGCGA-CAGCACCGACCACCCGAACGCGCTGGGCATCGTCTTCGCGCTG 40156 Query 152521 GATGTCACCGGGTCCAA---CTACACCGCCGC-CGTGGCCGTGCACGCCAAGCTGCCGCA 152576 || || ||||| || | | ||| | |||| | || | ||| | | ||||| || Sbjct 40155 GACGTGACCGGCTCGATGGGCGACATC-CCGCGCATGCTGGCGCAGCGCGACCTGCCCCA 40097 Query 152577 GTTGTTCGGCCTGCTGCAGCGCAAGGGCCTGATCGAGGACCCGCAGATTCTCATCGCGGC 152636 ||| | |||||||| | |||| | ||| |||||||||||||| | ||| || ||| Sbjct 40096 GTTCATGGGCCTGCT-CGGCGCCTGCGCCG--TCGAGGACCCGCAGGTGCTCTTCATGGC 40040 Query 152637 CACCGGTGATGCCAACAGCGACCGGGTGCCGCTGCAGGTCGGCCAGTTCGAGTCC 152691 | ||||| |||| | ||| | |||||||||||| ||||||||||||||| Sbjct 40039 CGTGGGTGACGCCACCTCGGACAACGCGCCGCTGCAGGTGGGCCAGTTCGAGTCC 39985 >seq108213 Length=2622 Score = 82.4 bits (90), Expect = 8e-11 Identities = 114/155 (74%), Gaps = 5/155 (3%) Strand=Plus/Plus Query 115932 TGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGC 115991 |||| ||| |||| ||||||||| || | || || |||||||| ||||| || Sbjct 1568 TGCCGGTGGGGCC-GGGCCGTGGTTCGGGCGCCGGTTCGCTGGTGGCCTACTCGCTGCTG 1626 Query 115992 ATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAA-CCCGGA 116050 |||||| |||| ||| || ||||| | ||| ||||||||||||| |||| |||| | Sbjct 1627 ATCACCGACCTCGATCCGCTCCAGTACAATCTGCTGTTCGAGCGCTTCCTCAATCCCGAA 1686 Query 116051 C-CGCCCCGACTTCCCCGACATCGACGTCGACTTC 116084 | || ||| | |||||| ||||| |||||||| Sbjct 1687 CGCGTGTCGA--TGCCCGACTTCGACATCGACTTC 1719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500442610247760