Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_023729.1 Length=43036 Score E Sequences producing significant alignments: (Bits) Value seq109371 208 2e-49 seq69633 93.3 1e-14 >seq109371 Length=32687 Score = 208 bits (230), Expect = 2e-49 Identities = 355/514 (69%), Gaps = 3/514 (1%) Strand=Plus/Plus Query 36396 CAACAACGACTGCGTTCACGAAACCGAGAGAATGGCAGACGATTCGGTGGATCTGATTGT 36455 |||| |||||||||| || || ||| | | ||||| ||| || | ||| | | Sbjct 22916 CAACGACGACTGCGTGCAGGAGACCCGGCGCATGGCGTCCGACAGCGTCGGCCTGGTCCT 22975 Query 36456 CACCAGCATTCCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGATTTCGGCCA 36515 |||||||| || ||| || || ||||||||| |||||| || | ||| ||||| || Sbjct 22976 GACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCGAACTTCGCCGACTTCGGGCA 23035 Query 36516 CACCGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCG 36575 |||||| ||||| ||| |||| ||||||||||||||| ||| |||||||||| Sbjct 23036 CACCGATAGCAACGAGCACTTCTTCCAGCAGATGGACTACCTGGTGCCGGAGCTGCTGCG 23095 Query 36576 CATCCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTGTT---CGG 36632 | | || ||| ||| | | || |||||||||| |||||||| || ||| Sbjct 23096 CGTGCTGATGCCAGGCAGGGTGGCGGCGATCCACGTCAAGAACCGCATCGTGCCGAGCGG 23155 Query 36633 CAACGTCACCGGCGCCGGCGTGCCCACCGTGTCCCCGTTTCACGCCGAGGCGATCTTCCA 36692 || ||| |||| ||| | | |||| || |||||| || || || | | Sbjct 23156 CATGGTCGAGGGCGTTGGCTTCCAGACCGAGTACCCGTTCGACATGGACACGCTGGCCTG 23215 Query 36693 CGGCCGCAAACACGGCTTCGACTACCTCGGCATGATCACCGTCGTAACCGATGTGGTGCG 36752 | ||| ||||||||| ||||| ||||| | || || | || || ||||| || Sbjct 23216 CTTTCGCCGGCACGGCTTCCACTACATCGGCCGCAAGCCCATCATCACGGACGTGGTCCG 23275 Query 36753 GGAAAACAACCAGACGTACCGGCTGGGCTGGTCCGAGCAGTGCAAAGACGCCACCAAGAT 36812 ||| ||||||||||| ||| ||||||||||| |||||| ||||| |||| | | || Sbjct 23276 GGAGAACAACCAGACCTACAGGCTGGGCTGGAGCGAGCAATGCAAGGACGGTAGCCGCAT 23335 Query 36813 GGGCGTCGGCTCCCCGGAATACATTCTGCTGTTCCACAAACCGCAAACAGACAGGTCCCG 36872 |||| ||||| || ||| | ||||| |||| ||| ||| || ||| ||| Sbjct 23336 GGGCTTCGGCCTGTGCGAGTACCTGCTGCTCTTCCGCAAGGCGCCGACCGACGCTAGCCG 23395 Query 36873 TGGGTATGCCGACGTACCGGTCATCAAGAGCAAG 36906 ||| ||||||||| |||||||| ||||| |||| Sbjct 23396 TGGCTATGCCGACCTACCGGTCTTCAAGGACAAG 23429 Score = 93.3 bits (102), Expect = 1e-14 Identities = 251/373 (67%), Gaps = 16/373 (4%) Strand=Plus/Plus Query 35026 CCGGGCGAGATTCACTCGATGTTGTTGCCGCACCAG--CGCGATCTGGTGCGCTGGGCGG 35083 |||| |||||| || || ||||| | ||||||| |||| | || |||||| Sbjct 21510 CCGGCCGAGATCAACCCGCTGTTGAAGTTGCACCAGATCGCGGCC--GTCATCTGGGCAA 21567 Query 35084 TC-GCCGGGGGTAGGCGCGCGATCTTCGCGGCGTTCGGATTGGGCAAGACCGTGATGCAG 35142 || ||| || | ||| ||| | ||| ||| ||||| |||||||||| | |||| Sbjct 21568 TCCGCCTCGGCTGTGCG-GCGCTGTTCATGGCCTTCGGCCTGGGCAAGACGTTCGTGCAA 21626 Query 35143 CTGGAGATCGTGCGCCT-GTCCCTGGCGAAGCACGGCGGCGGTAAAGGTCTGATCGTGAT 35201 |||||||||||||| | |||| ||| || | ||| || | || |||||||| || Sbjct 21627 CTGGAGATCGTGCGGATCGTCC---GCGC-GCGCATCGGTGGCATGGGCCTGATCGTCAT 21682 Query 35202 GCCGCTGGGCGTGCGGATCGAGTTCGCCCACGACGCCCAAATGCTAGGCATCGAAACCCG 35261 || ||| || || ||||||| | |||||| | ||| |||||| | | Sbjct 21683 CCCACTGTCGGTCCGCCAGGAGTTCGTGCGCGACGCGGCGAAGCTGGGCATCAAGGTCAA 21742 Query 35262 GTTCGTTCGCCGCACAGAAGAAGTCGGCGGCGACG---GAATCTATCTCACCAACTATGA 35318 |||| | ||| || || || | | || | || | ||||| ||||||||||| || Sbjct 21743 GTTCATCCGCACCATCGACGAGGCTGACGACCCCGCGGGCATCTACCTCACCAACTACGA 21802 Query 35319 GAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACGGCCGTCTCACTCGACGAGGC 35378 | || || ||||| ||| ||||||||| ||||||| | | | || |||||||| Sbjct 21803 GTCGGTGCGGGACGGCAAGCTGGACCCGATGCTGTTCAGCGTGGCCAGCCTGGACGAGGC 21862 Query 35379 GAGCGTG-CTGCG 35390 | || || ||||| Sbjct 21863 G-GCTTGCCTGCG 21874 >seq69633 Length=120 Score = 93.3 bits (102), Expect = 1e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 36519 CGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCAT 36578 ||| || |||| ||||||||||| ||||||||| | ||| | ||||||||||||||||| Sbjct 120 CGATGATAACGAGCATTTCTGGGAGCAGATGGATTTCCTGATCCCGCAGCTGCTGCGCAT 61 Query 36579 CCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTG 36627 || ||||| || || ||| ||| ||| || ||||| |||||| || Sbjct 60 TCTGGCGCCCGGGCGGATCGCGGCCATCCATGTGAAGGATCGCATCGTG 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137411906017276