Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq108422 136 3e-27 seq108124 98.7 7e-16 seq12373 87.8 1e-12 >seq108422 Length=3279 Score = 136 bits (150), Expect = 3e-27 Identities = 202/280 (72%), Gaps = 11/280 (4%) Strand=Plus/Minus Query 94497 GTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCGGT 94556 ||| ||||| |||| ||| |||||| || || ||| ||||| ||||| ||| | Sbjct 2111 GTCGCCCATGCCCAGCAGCGCCTCGGCACCCATCTGGTCGAGGATGGTGCGGCTGTCGAT 2052 Query 94557 GAGGGACGCTG---TGGCGAACGACAGCCGCGAGGGCACGTTGCTCTTGATGAGGCCCGT 94613 ||| |||| ||| || ||||| |||| || | |||| |||||||||||| || Sbjct 2051 CTTGGA-GCTGACCTGG--AAGGACAGGCGCGTCGGGATGTTGGCCTTGATGAGGCCGGT 1995 Query 94614 CACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCCGCACGCGC 94673 | || ||||| || ||||||||||||||||||| || || ||||||||||| ||||| Sbjct 1994 GATGACGTCCACCGACGGCCGCTGCGTCGCCAGGATCAGGTGGATGCCGGCCGCGCGCGC 1935 Query 94674 CTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTG-TAGCCACCCATCATGA 94732 |||||||| | |||| | || |||| | | |||||| | ||| ||||||| | Sbjct 1934 TTTCTGCGCCAGGCGGGCGATCAGCTCCTCGATC---TTCTTGCCAACCA-CCATCATCA 1879 Query 94733 GGTCCGCGAGTTCATCCACCACTACCACGATGTAGGGGAG 94772 |||| || || || || | || || |||||| |||| || Sbjct 1878 GGTCGGCCAGCTCGTCGATGACGACGACGATGAAGGGTAG 1839 >seq108124 Length=5758 Score = 98.7 bits (108), Expect = 7e-16 Identities = 112/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 94599 CTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAAT 94658 |||||| ||||| || | ||| || || || ||||||||||||||||||| || || | Sbjct 148 CTTGATCAGGCCGGTAATCACGTCGACCGATGGCCGCTGCGTCGCCAGGATCAGGTGCAG 89 Query 94659 GCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTA 94718 ||||||||| ||||||||||| ||||| || | || |||| ||| |||||| Sbjct 88 GCCGGCCGCGCGCGCCTTCTGGGCGATACGCGCGATCAACTCCTCGACC---TTCTTGCC 32 Query 94719 GCCACCCATCATGAGGTCCGCGAGTTCATC 94748 | | ||||||| ||||| || || || || Sbjct 31 GACCACCATCATCAGGTCGGCCAGCTCGTC 2 >seq12373 Length=2096 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/232 (69%), Gaps = 12/232 (5%) Strand=Plus/Plus Query 94894 AGAAGGTGGGGGATACCGTTGTACGGGGTGAGCTCGACACATTTGGGGTCGATCATGATG 94953 || ||||| ||||| || | ||| || | ||||| |||||||||||||| ||| Sbjct 4 AGCAGGTGCGGGATGCCCTCGTAGACGGACATCTCGAGCATTTTGGGGTCGATCAGGATC 63 Query 94954 AGTTTGACCCGATCAGGGGTCGCCCGG-----TAGAGCAGCGAAACCAGCATTGAGTTGA 95008 || || ||| || | | ||| || |||||||| | | | | ||||| Sbjct 64 AGCCGCAC---ATC--GGCTGGATCGGATTTATACAGCAGCGACAAAATGGTCGCGTTGA 118 Query 95009 TGAAGCTGGACTTGCCCGATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTGGCCA 95068 || | ||||||||||| ||||| | ||| ||||||||||| |||||||||||||||| Sbjct 119 TGCCGACCGACTTGCCCGAACCGGTGGTGCCGGCCACCAGCAGGTGCGGCATCTTGGCCA 178 Query 95069 GGTTCAGGGA-GACGTCCTTACCCTCGACGTCCTTGCCCACTGCCACGGTCA 95119 || || | || ||| ||| || ||| |||||||| | || | ||||| Sbjct 179 GG-TCGGCGATGACCGGCTTGCCGGCGATATCCTTGCCGAGCGCGATGGTCA 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339660646056368