Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08]
111,201 sequences; 70,469,476 total letters
Query= NC_024146.1
Length=56702
Score E
Sequences producing significant alignments: (Bits) Value
seq84563 104 8e-18
>seq84563
Length=11991
Score = 104 bits (114), Expect = 8e-18
Identities = 242/363 (67%), Gaps = 8/363 (2%)
Strand=Plus/Minus
Query 33493 ATTTTATATCATGGTACTCGTGGCCCTGGAAAGACCGATGCTCAGTTGATGCGTTTTCGT 33552
||| | |||||||| | ||||| ||||||||||||||| | ||| | ||||| |||||
Sbjct 7008 ATTCTTTATCATGGCGCGCGTGGTCCTGGAAAGACCGATACCCAGCTTATGCGCTTTCGA 6949
Query 33553 CGTTATGTTGGCATGGGGTATGGTAAACACTGGCGCGGTATCATTTTTGACCGAGAATAC 33612
||| | || || || || || ||| | |||||| || || || || ||||| || ||
Sbjct 6948 CGTAACGTCGGTATTGGCTACGGTCCATTCTGGCGAGGCATTATCTTCGACCGCGAGTAT 6889
Query 33613 AAAAACTTAGATGACTTAGTTGCAAAGTCACAGCGTTGGTTTCCTGAATTTAATGATGGT 33672
|| | | || ||||| || | ||| | |||| |||||| | || | || |||
Sbjct 6888 AAGCAGCTTGACGACTTGGTGACTAAGGCTAAGCGCTGGTTTATGCAGTTCCAAGACGGT 6829
Query 33673 TGTAAATTCTTATCT----TCCAAGTCAGATTATAAATGGGTATGGCCTAGCGGCGAAGA 33728
| |||| ||| ||| || || |||||| ||||||| ||||| ||
Sbjct 6828 GCT---GTCTT-TCTGGAAAGCAATTCTACATACAAATGGCGTTGGCCTACTGGCGAGGA 6773
Query 33729 ACTAATGTTCCGTGTTGCTAAAAAACCTAAGGATTACTGGCTGTACCACGGTCAGGAATT 33788
| | | ||||| || | || || | || || ||| | |||||||| || |
Sbjct 6772 ATTGCTTTTCCGAACGGCAATGAAGCCGGATGACTATTGGAGCTTTCACGGTCACGAGTA 6713
Query 33789 TCCATTTATTGGATGGAACGAATTAACTAAATATCCTGATAGTGGGCTTTATGAAGCAAT 33848
|||||| || ||||||||||| | || ||||| || ||| | | |||| || |||
Sbjct 6712 TCCATTCATCGGATGGAACGAGCTTACGAAATACCCCGATGGACGTGTTTACGAGAAAAT 6653
Query 33849 GAA 33851
|||
Sbjct 6652 GAA 6650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181085358448368
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |