Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_024354.1 Length=149162 Score E Sequences producing significant alignments: (Bits) Value seq109209 87.8 2e-12 seq23596 84.2 2e-11 >seq109209 Length=24719 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 146725 CGGTGTATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGAT 146784 ||| || |||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct 22939 CGGGGTGTAGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCCGCGGTTCGAA 22880 Query 146785 TCCAGCTACACCGACCAA 146802 ||| || |||||||| Sbjct 22879 TCCGTGCACCCCGACCAA 22862 >seq23596 Length=1734 Score = 84.2 bits (92), Expect = 2e-11 Identities = 205/301 (68%), Gaps = 10/301 (3%) Strand=Plus/Plus Query 111914 GCGATCGCATTAATGGTCAAGTCCCGGCGGGCCAAATCCTCTTCGATGGTCACATCTGGG 111973 ||||| || || ||||| | ||| || || ||| || ||||||| || || || ||| Sbjct 773 GCGATGGCGTTGATGGTGAGGTCACGCCGCACCAGGTCTTCTTCGAGCGTGACCTC-GGG 831 Query 111974 CTGAACATC-ACCTCGAAATCGTGGTATCCTG-CGC-CAGTTGAACGCTCGGTACGGGCC 112030 | | | | | |||| || |||| || | ||| | ||| || ||||| || || Sbjct 832 CGCGGCGTGGATCACGAAGCCGCGGTAGCCGGGCGCGCTTTTG--CGTTCGGTGCGCGCG 889 Query 112031 AGGGCGTACTCTTCCTTGGTCTCAGGATGCAGGTAAACTGGGAATGCGGCACCGACTTGC 112090 || ||||| ||||||| || | ||||||||| | || ||||| | ||||| | Sbjct 890 AGCGCGTATTCTTCCTGCGTTTTCGGATGCAGGAAGACCGGGAAGTCCTTGCCGACCGGG 949 Query 112091 TCGAAGCCGAGTGCCATCATCTCTTCGTGGGTGGAGCCGACCACAACGTAGTCACGGTCT 112150 |||||||| || | ||||| |||| |||| |||||| || |||| ||| |||| Sbjct 950 CGAAAGCCGAGCGCGAGCATCTGTTCGACCGTGGCGCCGACGACGACGTGGTCCTGGTCC 1009 Query 112151 TTGCTCT--CAACACCCATCAGTTCATCGCGGACCGCGCCGCCGACCAGATAGATTTTCA 112208 | || | ||| || | ||| | ||||| || ||||||||||| | ||| | |||| Sbjct 1010 T-GCACGGGCAAG-CCAAGCAGCGCGTCGCGCACGGCGCCGCCGACGACGTAGGTCTTCA 1067 Query 112209 T 112209 | Sbjct 1068 T 1068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476527099379120