Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_024365.1 Length=51090 Score E Sequences producing significant alignments: (Bits) Value seq109454 196 2e-45 seq57751 96.9 1e-15 >seq109454 Length=55839 Score = 196 bits (216), Expect = 2e-45 Identities = 167/206 (81%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 22736 GGCTCTCTGATTGCGTCGCTGTCGTAGTGGTACCGCCGCGACTTGCTGAGCAGGAACAGG 22795 |||||| ||||||||| ||||||| |||| || |||||| ||||| || | Sbjct 34507 GGCTCTTGCATTGCGTCGAAGTCGTAGAAGTACTGCTCCGACTTCGACAGCAGAAATATC 34566 Query 22796 TATTCGTGAGCCTTGGTGCAGCGGTCACGCGTCGACTCCGGCATAGGGTTTGGCTTGTGC 22855 | ||||| ||||||||||||||||| |||| ||| ||||| ||||| ||||||||| Sbjct 34567 TGCTCGTGCGCCTTGGTGCAGCGGTCGCGCGCGCTCTCTGGCATCGGGTTGGGCTTGTGC 34626 Query 22856 CAGATGATGTCCTGCCGGAGATACCAGCCGTCGTCCTGCAGCGCGAAGGCCAGGCGCCAG 22915 |||||||| ||||| ||||| |||| || |||||||||||||||||||||| ||||||| Sbjct 34627 CAGATGATTTCCTGACGGAGCCACCAACCATCGTCCTGCAGCGCGAAGGCCACGCGCCAG 34686 Query 22916 GGCATGCCCATCAAGTCTTTCGGCTT 22941 ||| |||||||| |||||||||||| Sbjct 34687 GGCTGGCCCATCATGTCTTTCGGCTT 34712 >seq57751 Length=11106 Score = 96.9 bits (106), Expect = 1e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 15655 CTTGCATGGGGTGCTAGGGGTCGAGTGTTCGAATCACTCCGTCCCGACCATATAATTCAA 15714 |||||||||||||| ||||||||||||||||||||||||||||||||||| | |||| Sbjct 1029 CTTGCATGGGGTGCAAGGGGTCGAGTGTTCGAATCACTCCGTCCCGACCAACAGAATCAA 1088 Query 15715 TGACTTAG 15722 |||||||| Sbjct 1089 TGACTTAG 1096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163150672728824