Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08]
111,201 sequences; 70,469,476 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq70823 149 1e-30
seq110395 105 1e-17
>seq70823
Length=785
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | | ||| || || ||||| || ||||| |||||||| || || ||||| ||
Sbjct 346 CCTCCACAGAGACGAAGGACCAAGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCTGAA 287
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | || || | || || || ||||||||||| || | || || || |||||
Sbjct 286 AGAGTGCAGCCATCCTGAAGCTGCTTGCCAGCAAAGATGAGACACTGCTGGTCAGGAGGG 227
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| | |||||||| ||||| ||||| |||| |||||| | || || ||
Sbjct 226 ATGCCTTCCTTGTTCTGAATCTTGGCTTTCACATTGCCAATGGTATCAGTTGGCTCAACC 167
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || || ||||| ||||| | ||||| ||||||||||| ||
Sbjct 166 TCTAATGTAATAGTCTTCCCTGTGAGGGTCTTGACAAATATCTGTAT 120
>seq110395
Length=10286
Score = 105 bits (116), Expect = 1e-17
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || || || || || || || ||||| || || || || || || | | ||
Sbjct 9971 ACGGAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCC 9912
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||| || || || || || || ||||| || | |||||||| || || || ||||||||
Sbjct 9911 GTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCTTCCTT 9852
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| || || || || || || || || || ||||| | ||| || || | || ||
Sbjct 9851 ATCCTGGATTTTGGCCTTAACGTTGTCGATGGTATCGGACGATTCGACCTCGAGGGTGAT 9792
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||| || || | |||||| || || ||||||||
Sbjct 9791 CGTCTTCCCAGTAAGCGTCTTAACGAAGATCTGCAT 9756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 980428329117139
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |