Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq58313 168 6e-37 seq110395 131 2e-25 seq107681 116 4e-21 seq106734 102 8e-17 seq69314 91.5 1e-13 seq70823 86.0 6e-12 >seq58313 Length=1260 Score = 168 bits (186), Expect = 6e-37 Identities = 357/522 (68%), Gaps = 27/522 (5%) Strand=Plus/Minus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||| ||||| |||||||||||||||||||| |||||||||| | ||| || | | ||| Sbjct 613 GTAATCGCCCACGCGTTTCTCAAAAAAGTTGGTTTTGCCCTGTAGCGATATCATCTCCAT 554 Query 120414 AAACTCGAACGG-GTTGCT-CGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGT 120471 ||| || ||||| ||| | | | || | |||||| | ||||| | | ||| | Sbjct 553 AAAATCAAACGGATTTGATGCACCGTATA--CTTTCGGATAGCCCAGTTCGCCCAGCCAT 496 Query 120472 CGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCC 120531 | ||| |||||||||||||| |||| | ||| | |||||||| || | |||| Sbjct 495 CTGTCGGCTACAAACTCAATATACTGACTCATCAGTTTGGCGTTCATACCTATTAACGAT 436 Query 120532 ACCGGCAACGCCGACG-TGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACA---T 120587 ||||||| || || || ||| ||| ||||| || || || ||||| || || | | | Sbjct 435 ACCGGCAGCG-CGTCGCTGATAAATTCCTTTTCTATCTCTACCGCGTCTTTAATAATTTT 377 Query 120588 GGCGA--GCAT-AGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644 || || || | ||| | || ||||| ||| | || | | ||| |||||| Sbjct 376 GGTGACCGCCTCAGT------GCTCAGCTTGTTTTCCA---GCATGCTGTACAGCAGGCA 326 Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704 ||||| || |||| || || |||||||||||||||||||| || || ||||| || Sbjct 325 GGCAAATTCGCAGTGCGAACCTTCATCGCGCGATATCAGCTCGTTACTGAAAGTCAGCCC 266 Query 120705 GGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACAC 120764 ||||| | || | || | |||| || | | || || ||||||||||| | Sbjct 265 TGGCATCAATCCGCGTTTTTTCAGCCAGAAGATAGAGCAGAAACTACCCGAAAAGAAGAT 206 Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGAT 120824 ||| || || ||||| || |||| ||||||| ||| || ||||| ||| ||| Sbjct 205 GCCTTCAACCGCAGCAAATGCCACCAAACGCTCGG-CAAAGTTGCCGT-----TGTTGAT 152 Query 120825 CCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 ||| || ||||| ||||| || || |||| || || || Sbjct 151 CCAGCGCAGCGCCCATTCGGCTTTCTTCTGCACACATGGTAT 110 >seq110395 Length=10286 Score = 131 bits (144), Expect = 2e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 133457 aTGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| || || ||||| |||||||||||| | |||| ||| || | ||| Sbjct 10187 ATGGAGGGTCGATTCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCTTCCAACTG 10128 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || |||| || |||||||||||||| ||||||||||||||||| |||||| Sbjct 10127 CTTGCCTGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATCTT 10068 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | ||||||| | ||| || |||| ||||| ||| || || || Sbjct 10067 AGCCTTGACGTTATCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTCCCAGT 10008 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 || || || ||||| || |||||| Sbjct 10007 GAGCGTCTTGACGAATATTTGCATG 9983 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 133455 aaaTGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||||||||| ||||| || ||||| ||| | || | |||||||||| Sbjct 9961 AAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGC 9902 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || ||||| || ||||| |||||||||||||| || ||| Sbjct 9901 TGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCTTCCTTATCCTGGATT 9842 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | || |||| | || || |||| ||||| || || || Sbjct 9841 TTGGCCTTAACGTTGTCGATGGTATCGGACGATTCGACCTCGAGGGTGATCGTCTTCCCA 9782 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || ||||| ||||||||| Sbjct 9781 GTAAGCGTCTTAACGAAGATCTGCATG 9755 >seq107681 Length=5071 Score = 116 bits (128), Expect = 4e-21 Identities = 352/532 (66%), Gaps = 19/532 (4%) Strand=Plus/Minus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||| || || || | ||| ||||| || || |||||||| | | || || | | ||| Sbjct 4503 GTAATCTCCTACCCTTTTTTCAAAGAAATTGGTTTTGCCTTGTAGGGATATCATCTCCAT 4444 Query 120414 AAACTCGAACGGGTT-GCT-CGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGT 120471 ||| || |||||||| | | ||| || | | || || | |||| | | | | Sbjct 4443 AAAATCAAACGGGTTAGATGCGCCGTACACT--TTAGGATAACCCAGTTCGCCTAACCAA 4386 Query 120472 CGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCC 120531 ||||| || |||||||||||||| | || ||| | | |||||||| || | |||| Sbjct 4385 CGGTCAGCCACAAACTCAATGTATTGGCTCATCAATTTAGCGTTCATCCCTATTAACGAT 4326 Query 120532 ACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCG 120591 |||||||| || || | ||| || || ||||| || ||||| || | | || | Sbjct 4325 ACCGGCAATGCGTCGGTAATAAATTCTTTTTCAATCTCTACCGCGTCGGTAATAATTTTG 4266 Query 120592 AGCATAGTGTGGCCGGGCATCTTGTGTTCGATGC-GCGTTCGGTAGTACAGGCACGCAAA 120650 | | | || | | || | | ||| | | || | | ||| |||||| ||||| Sbjct 4265 -GTA-ACTGCTTCTGTGCTCAGTTTATTC--TCCAGCATACCGTAAAGCAGGCAGGCAAA 4210 Query 120651 GTCC--GTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGC 120708 || ||||| | || || |||||||||||||| ||||| ||||| |||| |||||| Sbjct 4209 TTCGCAGTGTGAA--CCTTCATCGCGCGATATCAGTTCGTTACTAAAGGTCAATCCGGGC 4152 Query 120709 ATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCC 120768 || | ||| | || | |||| || | ||||| || |||||||| | ||| Sbjct 4151 ATCAGGCCACGTTTTTTTAACCAGAAGATAGAACAGAAGCTCCCTGAAAAGAAAATGCCT 4092 Query 120769 TCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCAC 120828 || || ||||| || |||| |||||||| || || ||||| ||| |||||| Sbjct 4091 TCAACAGCCGCAAATGCTACCAAACGCTCGGCAAAGGT-GCCGT-----TGTTGATCCAG 4038 Query 120829 TTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGT 120880 || |||||||| ||||| || |||| || || ||| || | ||||| Sbjct 4037 CGCAGCGCCCACTCTGCCTTCTTTTGCACACATGGAATCGTATCAACCGCGT 3986 >seq106734 Length=403 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 133457 aTGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| ||||| || || | |||| | |||||| | ||| Sbjct 234 ATGAAGGGTGGACTCCTTCTGGATATTATAGTCCGAGAGCGTGCGCCCGTCCTCCAACTG 175 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| ||| | || || || || |||||||| ||||| ||||||||||| ||||| Sbjct 174 CTTGCCGGCGAAGATCAGACGTTGTTGGTCGGGGGGGATACCTTCCTTGTCCTGAATCTT 115 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | ||||| | | ||| || || | |||| || ||||| || Sbjct 114 GGCCTTGACGTTGTCGATAGTGTCCGAAGACTCTACCTCCAGCGTGATTGTCTTGCCCGT 55 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || |||||||| Sbjct 54 GAGCGTCTTCACAAAGATCTGCAT 31 >seq69314 Length=381 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 149471 GTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGG 149530 ||| || || || |||||||| ||||||||||| || |||||| || ||||||| || Sbjct 238 GTAAATACCATCAATGCTGTCTTCCTTCATGGTCAACAAAAAGCATGATGACATTTGTGG 179 Query 149531 AAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCAT 149590 | |||||||| |||| || ||| | ||||||||||| | || |||||| Sbjct 178 TTTTGGAGTGCCGGCGTTAAACAACGTTGGGGTTGCGTGTGTAAACCAGCGCTCGCTCAT 119 Query 149591 CATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCG 149650 || | ||||| | || ||| || || || || ||||| |||| | ||||| Sbjct 118 CAGGTTGTACGTTTTGATGGCGCTTTCAATATCTTCTTTGTGGATACCTACCGATACGCG 59 Query 149651 CATCAGCATATGCTGCGGTCGCTCCGCCACTTT 149683 ||| | ||| |||||||| || || || | ||| Sbjct 58 CATAAACATGTGCTGCGGGCGTTCGGCAATTTT 26 >seq70823 Length=785 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 aaaTGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| ||||||||||| || |||||||| | ||| | |||| ||| Sbjct 325 AAGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCTGAAAGAGTGCAGCCATCCTGAAGC 266 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || | ||||| | ||||||||| ||||||||||||||||||| ||| Sbjct 265 TGCTTGCCAGCAAAGATGAGACACTGCTGGTCAGGAGGGATGCCTTCCTTGT-TCTGAAT 207 Query 133575 TTTTGCTTGAGC--TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 || |||| | ||| ||| || || || ||||| || || | || | || || | Sbjct 206 CTTGGCTTTCACATTGC-CAATGGTATCAGTTGGCTCAACCTCTAATGTAATAGTCTTCC 148 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || || || ||||| || Sbjct 147 CTGTGAGGGTCTTGACAAATATCTGTAT 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482748839045240