Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq110395 96.9 2e-15 seq106734 84.2 1e-11 >seq110395 Length=10286 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| || ||| ||| || || |||||||| |||||||| || || |||| || Sbjct 9964 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCG 9905 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || ||||| || || | |||||| ||||| | || | ||||| || || Sbjct 9904 AGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCTTCCTTATCCTGG 9845 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| || ||| | ||| | ||| ||| ||||| || || | |||||||| || Sbjct 9844 ATTTTGGCCTT-AACGTTGTCGATGGTATCGGACGATTCGACCTCGAGGGTGATCGTCTT 9786 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||| || || ||||||||||| Sbjct 9785 CCCAGTAAGCGTCTTAACGAAGATCTGCAT 9756 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || || |||||||||||||| ||||| |||| ||||| || || || |||||| Sbjct 10174 TCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCTTCCAACTGCTTGCCTGCAAAA 10115 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||| |||||||| || |||| | ||||| ||||| || || || | || Sbjct 10114 ATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTA 10055 Query 33679 GTCACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 | ||||||| || || || || | ||||| || || || || | ||| || || Sbjct 10054 TCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTCCCAGTGAGCGTCTTGACG 9995 Query 33739 AAGATCTGCAT 33749 || || ||||| Sbjct 9994 AATATTTGCAT 9984 >seq106734 Length=403 Score = 84.2 bits (92), Expect = 1e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || ||| ||| || || || || || || ||||| ||||| |||| ||||| || Sbjct 234 ATGAAGGGTGGACTCCTTCTGGATATTATAGTCCGAGAGCGTGCGCCCGTCCTCCAACTG 175 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || ||||| || |||| ||| || || || | || | |||||| ||||| ||| || Sbjct 174 CTTGCCGGCGAAGATCAGACGTTGTTGGTCGGGGGGGATACCTTCCTTGTCCTGAATCTT 115 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 || | | | ||| | ||||| || || || || | |||||| || || || | Sbjct 114 GGCCTTGA-CGTTGTCGATAGTGTCCGAAGACTCTACCTCCAGCGTGATTGTCTTGCCCG 56 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | | ||| || |||||||||||||| Sbjct 55 TGAGCGTCTTCACAAAGATCTGCAT 31 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328258519897920