Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_025427.1 Length=54506 Score E Sequences producing significant alignments: (Bits) Value seq111000 123 9e-24 seq109371 91.5 5e-14 >seq111000 Length=9260 Score = 123 bits (136), Expect = 9e-24 Identities = 146/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 50428 CGTCCTATCCTGCGCTGGCACGGCAGCAAATGGCGGATCGCCGAATGGGTCATTTCCCAC 50487 || ||| | || || ||||||||| ||||||||||| |||| |||| |||| || || Sbjct 179 CGGCCTGTGCTTCGTTGGCACGGCGGCAAATGGCGGCTCGCGCCATGGATCATCTCGCAT 238 Query 50488 TTTCCGCAGCATAAGATCTATGTGGAGCCGTTCGGCGGCTCGGCTTCGGTGCTGCTGCAG 50547 |||||| ||| |||||| || || || ||||| ||| |||| ||||| |||||||| Sbjct 239 TTTCCGGCGCACGGGATCTACGTCGAACCATTCGGTGGCGCGGCATCGGTCCTGCTGCAA 298 Query 50548 AAACCGCGCGCCGTAACCGAAATCTATAACGACCTCGAT--CGGGATCTGGTGAATCTGT 50605 || | || | || ||||| |||| |||||||||||| | | || || ||||||| Sbjct 299 AAGCAGCCCTGCGGTACCGAGGTCTACAACGACCTCGATAACCGCGTC--GTCAATCTGT 356 Query 50606 TTCGGATTCTGCGCGA 50621 ||||| | || || || Sbjct 357 TTCGGGTGCTCCGGGA 372 >seq109371 Length=32687 Score = 91.5 bits (100), Expect = 5e-14 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 36808 CGATCCAGTTGCCCCACTGCTTGAAGAGATGAGGCGTGTCGGAGATCTCGCACTGGTCAC 36867 ||||||| | |||||||||||||||| || | | | || | |||||||||| | Sbjct 5502 CGATCCACTCGCCCCACTGCTTGAAGTGAAACGCCACGCTGGCCGCCGCGCACTGGTCGC 5561 Query 36868 GGACGGCGCGCGCCCAGCTGGGGTGCATCGGGCGTGCGCCTCGGCCGCTTTCGCCGCC 36925 | | |||||| |||||||||||||||||||| || ||||| | ||||| ||||| || Sbjct 5562 GCAGGGCGCGGGCCCAGCTGGGGTGCATCGGACGCGCGCCAGGCCCGCTCTCGCCTCC 5619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 174067437949416