Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq58313 129 6e-25 seq110395 118 1e-21 seq107681 109 5e-19 seq103458 89.7 5e-13 >seq58313 Length=1260 Score = 129 bits (142), Expect = 6e-25 Identities = 301/448 (67%), Gaps = 7/448 (2%) Strand=Plus/Plus Query 46824 GCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCC 46883 |||||||| |||||||||| || || |||||| | || |||||||| ||||| | Sbjct 170 GCCGAGCGTTTGGTGGCATTTGCTGCGGTTGAAGGCATCTTCTTTTCGGGTAGTTTCTGC 229 Query 46884 GCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTG 46943 | || || | | |||| || | ||||| || ||||| |||||||||||| || Sbjct 230 TCTATCTTCTGGCTGAAAAAACGCGGATTGATGCCAGGGCTGACTTTCAGTAACGAGCTG 289 Query 46944 ATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAGACGCGCGTG 47003 || |||||||| ||||| ||| || ||||| || || |||| | || || Sbjct 290 ATATCGCGCGATGAAGGTTCGCACTGCGAATTTGCCTGCCTGCTGTACAGCATGC---TG 346 Query 47004 AATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGGGAGGCGGT-GAGCATCGA 47062 | | || | | | | || || || | || ||| || ||||| ||| || || Sbjct 347 GAAAACAAGCTGAGCACTGAGGCGGTCACCAAAATTATTAAAGACGCGGTAGAG-ATAGA 405 Query 47063 AAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT-A 47121 |||||| ||| | | | |||||||| || | || | || |||||||| || || | Sbjct 406 AAAGGAATTTATCAGCGACGCGCTGCCGGTATCGTTAATAGGTATGAACGC-CAAACTGA 464 Query 47122 TGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAAT 47181 || | | |||||||||||||| || || | | ||| | || || | |||||| Sbjct 465 TGAGTCAGTATATTGAGTTTGTAGCCGACAGATGGCTGGGCGAACTGGGCTATCCGAAAG 524 Query 47182 ATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCA 47241 | ||| ||||||||||| |||||| | | || ||||| |||||||||||| Sbjct 525 TATACGGTGCATCAAATCCGTTTGATTTTATGGAGATGATATCGCTACAGGGCAAAACCA 584 Query 47242 ATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 | ||||| |||||||| || || || || Sbjct 585 ACTTTTTTGAGAAACGCGTGGGCGATTA 612 >seq110395 Length=10286 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | | ||||| || || |||||||||||| | ||||||| || ||| Sbjct 9964 ACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCG 9905 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| |||| |||||||||||||| || || |||||||| ||||| Sbjct 9904 AGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCTTCCTTATCCTGG 9845 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | || | ||||||| || || || |||| || | ||| || Sbjct 9844 ATTTTGGCCTTAACGTTGTCGATGGTATCGGACGATTCGACCTCGAGGGTGATCGTCTTC 9785 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 ||||| || || || | ||| ||||||||| Sbjct 9784 CCAGTAAGCGTCTTAACGAAGATCTGCATG 9755 >seq107681 Length=5071 Score = 109 bits (120), Expect = 5e-19 Identities = 338/515 (66%), Gaps = 21/515 (4%) Strand=Plus/Plus Query 46761 CCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACG 46820 ||||| || | || ||||| ||||||| || |||||| | | || ||| Sbjct 4003 CCATGTGTGCAAAAGAAGGCAGAGTGGGCGCTGCGCTGGATCAACAACGGCACCT----- 4057 Query 46821 CTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTT 46880 | |||||||| |||| ||||| ||| || |||||| | || ||||| || || || Sbjct 4058 -TTGCCGAGCGTTTGGTAGCATTTGCGGCTGTTGAAGGCATTTTCTTTTCAGGGAGCTTC 4116 Query 46881 GCCGCCATTTTTTACATTAAAACCAAA---GGCATAATGCCGGGCCTGACGTTCAGTAAC 46937 | || || | |||||| ||| ||| | ||||| || |||| || |||||| Sbjct 4117 TGTTCTATCTTCTGG-TTAAAA--AAACGTGGCCTGATGCCCGGATTGACCTTTAGTAAC 4173 Query 46938 GAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAGACG 46997 || |||| |||||||| ||||| |||| || ||||| || || |||| | | Sbjct 4174 GAACTGATATCGCGCGATGAAGGTTCACACTGCGAATTTGCCTGCCTGCTTTACGGTATG 4233 Query 46998 CGCGTGAATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGGGAGGCGGT-GAG 47056 | | |||| ||| | | | | || | | | || ||| || ||||| ||| Sbjct 4234 CTGGAGAAT---AAACTGAGCACAGAAGCAGTTACCAAAATTATTACCGACGCGGTAGAG 4290 Query 47057 CATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACA 47116 || ||||| || ||| |||| | || |||| || | || | || |||||||| | Sbjct 4291 -ATTGAAAAAGAATTTATTACCGACGCATTGCCGGTATCGTTAATAGGGATGAACGCTAA 4349 Query 47117 GTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACC 47176 | ||| || |||| |||||||||||||| || ||| ||| | | || || | || Sbjct 4350 ATTGATGAGCCAATACATTGAGTTTGTGGCTGACCGTTGGTTAGGCGAACTGGGTTATCC 4409 Query 47177 GAAATATTTTAATGCTCGT--AATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGC 47234 ||| | || || | | || |||||||| |||||| | | || || || | ||| Sbjct 4410 TAAAG--TGTACGGCGCATCTAACCCGTTTGATTTTATGGAGATGATATCCCTACAAGGC 4467 Query 47235 AAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 ||||||||||| || || ||| | || ||||| || Sbjct 4468 AAAACCAATTTCTTTGAAAAAAGGGTAGGAGATTA 4502 >seq103458 Length=5285 Score = 89.7 bits (98), Expect = 5e-13 Identities = 177/262 (68%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 148110 GTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGG 148169 |||||| || || ||||| || | ||| | | | ||| ||||| | ||||||||| Sbjct 1229 GTAGATACCCTCAATGCTATCTTCTTTCATACAGATCAAGAAACAACTGCTCATTTGCGG 1170 Query 148170 AATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCAT 148229 | |||| || || ||| ||||| ||| ||||| || || | || | ||| Sbjct 1169 ATGTGGCGTGCCAGCGTTGAACAGGGTCGGAGATGCGTGAGTGAAGTAGCGTTCAGACAT 1110 Query 148230 CATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCG 148289 | || || || | | | ||| ||||| ||||||||||| | |||||| || Sbjct 1109 GAGATTGTAGGTTTCCAAAACTCGTTCAATGTCTGAACCGTGAATGCCAACCGCGACACG 1050 Query 148290 CATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATT 148349 ||||| |||||| || || ||||| || || | |||||| |||||||||| | Sbjct 1049 CATGATCATGTGTTGAGGGCGTTCTGCGACACGGCCATTGATCCTGAGAAGATAGGAACG 990 Query 148350 TTCGAGGGTTTTGTAACCAAAG 148371 ||| | ||||||| |||||||| Sbjct 989 TTCTAAGGTTTTGAAACCAAAG 968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475948704474360