Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq107811 111 2e-19 seq109030 102 9e-17 seq13662 100 3e-16 seq23854 93.3 5e-14 >seq107811 Length=6275 Score = 111 bits (122), Expect = 2e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 146998 TGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 || |||| ||||| || ||||||| ||| ||| || ||||| || || || ||| Sbjct 4315 TGCGCCATCATGTGCGTCAGCAGCGCGTACGAGGCGATATTGAACGGCACGCCGAGGAAG 4374 Query 147058 ATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGG 147117 ||||| | | ||||||||||||||||||||||| || ||||| ||||| |||||| Sbjct 4375 ATGTCGGCGCTGCGCTGGTACAGCTGGCACGAGAGCTTGCCATCGGCGACGTAGAACTGG 4434 Query 147118 CACAGGATGTGGCACGGCGGCAGCGCCAT-GGCGGGCAGGTCCGCGGGGTTCCAGGCCGA 147176 |||| |||||| |||||||| ||| ||||| | ||| || |||||| ||||| Sbjct 4435 AACAGCGCGTGGCAAGGCGGCAGTTTCATCTGCGGG-ATGTCGGCCACGTTCCATGCCGA 4493 Query 147177 GAC 147179 ||| Sbjct 4494 GAC 4496 >seq109030 Length=5052 Score = 102 bits (112), Expect = 9e-17 Identities = 189/275 (69%), Gaps = 12/275 (4%) Strand=Plus/Plus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 || ||||| |||||||| || |||||| | |||||||| |||| || |||||| Sbjct 2415 AGTTGGTCAACGCCCTGCCCGGCGTAGTCAGCGTCGCAGTCCGTGTACTGTGCGCCAAAG 2474 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351 |||||||||||||| ||||| | || || ||||| || ||| |||| ||| Sbjct 2475 TGCCTCCACTGGAACCCGTATATCGGGCCGAGGTCCCC-----TTCGCGGCGATGCGCCA 2529 Query 147352 GCCCGC-----TTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGG 147406 |||| | | ||| || || | ||||| | | || |||||||| ||| ||||| Sbjct 2530 GCCCTCGCGCATCGAGGAAGGCGCGAGACCCATTCGGGTTCCAGATGCGCAC-ACCTTGC 2588 Query 147407 CG-GAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACC 147465 || |||||| | |||||| | || || | |||||| ||||||||| | | || Sbjct 2589 CGCGAGAGCAGCGCCCCGTCCGTCGCCCCGCGCACGAACCACAGCAGCTCCGCGATCACG 2648 Query 147466 CCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 || | | ||||| | ||| || |||||||| || Sbjct 2649 CCACGCAGGAAGACGCGCTTTGTCGTCAGCAGTGG 2683 >seq13662 Length=10689 Score = 100 bits (110), Expect = 3e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||| | |||||| |||| || | || || || | ||||| || || ||||||| Sbjct 10520 GCTCGAAGTGGTTCGAATAGAGATGGGTATCGCCGAGCGAATGCACGAACTCGCCCGGCT 10579 Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043 | || || ||| | || |||| ||| || ||||||| |||||||| |||||||||| Sbjct 10580 TCAGCCCCGTCGCCTGCGCCATCATCATCGTCAGCAGCGCATAGCTGGCGATGTTGAAGG 10639 Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGC 147093 | || |||||| || ||| |||| | ||| || ||||||||||| ||| Sbjct 10640 GAACGCCCAGGAACACATCCGCCGAGCGCTGATAGAGCTGGCACGACAGC 10689 >seq23854 Length=6065 Score = 93.3 bits (102), Expect = 5e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 147065 CCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGA 147124 |||| | ||| || ||||||||||| ||| |||| ||| || || |||||| ||||| Sbjct 2 CCGAGCGCTGATAGAGCTGGCACGACAGCCTGCCGTTGGCGACATAGAACTGGAACAGGC 61 Query 147125 TGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCA 147184 ||||| ||||||| | | | |||| |||||| ||||||||||||| ||| | || Sbjct 62 AATGGCAGGGCGGCAACTTGACGAGAGGCACGTCCGCCGGGTTCCAGGCCGTGACAATCA 121 Query 147185 GCCGCCTGCTCTCGGGGTTCCTCTTAATCTC 147215 | || | || || || || | ||| ||||| Sbjct 122 GGCGGCGACTGTCCGGATTGCGCTTGATCTC 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582676944386400