Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026585.1 Length=60727 Score E Sequences producing significant alignments: (Bits) Value seq36499 116 1e-21 seq109454 107 7e-19 seq109371 82.4 3e-11 >seq36499 Length=515 Score = 116 bits (128), Expect = 1e-21 Identities = 96/117 (82%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 44159 GATTGGGTGATCGTCGGCGGCGAGTCCGGCCGCGGCGCTCGGCCGATGCACCCCGACTGG 44218 |||||||| ||||||| ||||| |||||| ||||| |||||||||||||| || ||| Sbjct 267 GATTGGGTCGTCGTCGGGGGCGAATCCGGCGATGGCGCACGGCCGATGCACCCAGAGTGG 326 Query 44219 GCGCGGTCACTCCGGGACCAATGCCAGGCGGCCGGTGTGCCGTTCCTGTTCAAGCAA 44275 || || |||||||| || |||||| ||| ||||| ||||| || || ||||||||| Sbjct 327 GCTCGATCACTCCGCGATCAATGCGCGGCTGCCGGCGTGCCATTTCTTTTCAAGCAA 383 >seq109454 Length=55839 Score = 107 bits (118), Expect = 7e-19 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 44162 TGGGTGATCGTCGGCGGCGAGTCCGGCCGCGGCGCTCGGCCGATGCACCCCGACTGGGCG 44221 ||||||||| ||||||||| ||||| | ||| |||||||||| ||||| |||||| Sbjct 47889 TGGGTGATCTGCGGCGGCGAAAGCGGCCACCACGCGCGGCCGATGCTCCCCGCCTGGGCC 47948 Query 44222 CGGTCACTCCGGGACCAATGCCAGGCGGCCGGTGTGCCGTTCCTGTTCAAGCAA 44275 || || || ||||| ||| |||| ||||| ||||||||||||||||||||| Sbjct 47949 CGAGACCTGCGCGACCAGTGCGAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAA 48002 >seq109371 Length=32687 Score = 82.4 bits (90), Expect = 3e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 44162 TGGGTGATCGTCGGCGGCGAGTCCGGCCGCGGCGCTCGGCCGATGCACCCCGACTGGGCG 44221 ||| | |||||||| |||||| ||| | ||||| || |||||||||||| |||||| Sbjct 5631 TGGATCATCGTCGGAGGCGAGAGCGGGCCTGGCGCGCGTCCGATGCACCCCAGCTGGGCC 5572 Query 44222 CGGTCACTCCGGGACCAATGCCAGGCGGCCGGTGTGCCGTTCCTGTTCAAGCA 44274 || | || || ||||| ||| ||||||| | ||| |||| | |||||||| Sbjct 5571 CGCGCCCTGCGCGACCAGTGCGCGGCGGCCAGCGTGGCGTTTCACTTCAAGCA 5519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193948350255418