Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026587.1 Length=86246 Score E Sequences producing significant alignments: (Bits) Value seq107653 109 3e-19 seq109371 87.8 1e-12 >seq107653 Length=176415 Score = 109 bits (120), Expect = 3e-19 Identities = 154/214 (72%), Gaps = 12/214 (6%) Strand=Plus/Plus Query 68868 CTACTACCAGGTGGAGGTGCGTAATCCCACCTCTGGCG---GGGAACCGTACATCGGCGA 68924 |||||||||||||||| | ||||||| | || |||| |||||| ||| || Sbjct 44242 CTACTACCAGGTGGAGATCAAGGATCCCACGACACCCGACCGGGACCCGTACGTCGCTGA 44301 Query 68925 GTGCAACGATTTTATCGAAGCACTGGACATGACCTTCGCCGAGGCGAACGTGTTCAAGGC 68984 ||||||||| | ||||| || |||| ||||||||||||||||| |||| |||||||| Sbjct 44302 GTGCAACGACATCATCGAGGCTCTGGGCATGACCTTCGCCGAGGGCAACGCCTTCAAGGC 44361 Query 68985 AATCTGGCGA---AAAGCAGCCGAGCGTACCCTGGGCAAGAAAAAGAAAGGCAACA---A 69038 ||||||||| |||||| || ||||||| ||| | ||| ||| | Sbjct 44362 CATCTGGCGATCCTGCGCAGCC---CGGTCCCTGGGGCTCTCCAAGGAGGGCTACAAGGA 44418 Query 69039 CGCTGTCTATGACGCAGAGAAGATGGTATTCTTC 69072 || ||||| ||| | |||||| |||| |||||| Sbjct 44419 CGGGGTCTACGACTCCGAGAAGGTGGTCTTCTTC 44452 >seq109371 Length=32687 Score = 87.8 bits (96), Expect = 1e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 10761 TACGCCTACTTCGGTGTTAACCCCAGCACGGCGGATGCCAGTACAGACGATGCTACCGTC 10820 ||||||| |||||| || ||||||||||| || || |||| |||||| || || || Sbjct 1812 TACGCCTTCTTCGGCGTCAACCCCAGCACAGCCGACGCCACCGAAGACGACGCGACGGTG 1753 Query 10821 CGAAAGTGGCGAGGCTTCACCGAGAGAAATGGAGGCCATAGGTTCATTGTGGGGAACGTC 10880 || |||||| |||||| | | || ||||| | ||||| || || ||||| Sbjct 1752 CGCAAGTGGACCGGCTTCGTCAAAGCCTGGGGCGGCCAGCGCTTCATCGTCGGCAACGTG 1693 Query 10881 TTCTGCTATCGTGCCACCGACGTGAAAGAGCTGCGAAAAGTGGACGACCCGTTTGG 10936 ||| |||||| |||||||||||| || ||| ||| ||||| ||||| || Sbjct 1692 TTCGCCTATCGCGCCACCGACGTGCGCGACCTGGCCGGAGTAGACGATCCGTTCGG 1637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 275488534120327