Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026588.1 Length=60285 Score E Sequences producing significant alignments: (Bits) Value seq109371 187 1e-42 seq109454 129 2e-25 seq69633 107 7e-19 seq36499 100 1e-16 seq81106 98.7 4e-16 >seq109371 Length=32687 Score = 187 bits (206), Expect = 1e-42 Identities = 379/558 (68%), Gaps = 11/558 (2%) Strand=Plus/Plus Query 45296 CAACAACGACTGCGTACCCGAAACCAACAGCATGGCAGACAATTCGGTGGACCTGATCGT 45355 |||| |||||||||| | || ||| ||||||| | | || | |||| || | Sbjct 22916 CAACGACGACTGCGTGCAGGAGACCCGGCGCATGGCGTCCGACAGCGTCGGCCTGGTCCT 22975 Query 45356 CACCAGCATTCCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCA 45415 |||||||| || ||| || || ||||||||| |||||| || | ||||||||| || Sbjct 22976 GACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCGAACTTCGCCGACTTCGGGCA 23035 Query 45416 CACCGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCG 45475 |||||| ||||| ||| |||| ||||||||||||||| |||| | |||||||| Sbjct 23036 CACCGATAGCAACGAGCACTTCTTCCAGCAGATGGACTACCTGGTGCCGGAGCTGCTGCG 23095 Query 45476 CATCCTCGCGCCCGGGCGGATCTACGCCTGCCATGTCAAGGACCGCATCTT---GTTCGG 45532 | | || ||| || || | || ||| |||||| |||||||| | | ||| Sbjct 23096 CGTGCTGATGCCAGGCAGGGTGGCGGCGATCCACGTCAAGAACCGCATCGTGCCGAGCGG 23155 Query 45533 CAACGTCACCGGCGCAGGCGTTCCCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTCCA 45592 || ||| |||| ||| | | |||| | ||||||| || || || | | Sbjct 23156 CATGGTCGAGGGCGTTGGCTTCCAGACCGAGTACCCGTTCGACATGGACACGCTGGCCTG 23215 Query 45593 CGGCCGCAAACACGGCTTCGACTACCTCG---GCATGATCATCGTGGTCACCGATGTGGT 45649 | ||| ||||||||| ||||| ||| ||| | |||| |||| || ||||| Sbjct 23216 CTTTCGCCGGCACGGCTTCCACTACATCGGCCGCAAGCCCATC---ATCACGGACGTGGT 23272 Query 45650 GCGGGAAAACAACCAGACGTACCGGCTGGGCTGGTCCGAGCAGTGCAAAGACGCCACCAA 45709 ||||| ||||||||||| ||| ||||||||||| |||||| ||||| |||| | | Sbjct 23273 CCGGGAGAACAACCAGACCTACAGGCTGGGCTGGAGCGAGCAATGCAAGGACGGTAGCCG 23332 Query 45710 GATGGGCGTTGGCTCCCCGGAATACGTTCTGTTGTTCCACAAACCGCAGACAGACAGGTC 45769 |||||| | ||| || ||| | ||| | |||| ||| ||| ||| ||| | | Sbjct 23333 CATGGGCTTCGGCCTGTGCGAGTACCTGCTGCTCTTCCGCAAGGCGCCGACCGAC-GCTA 23391 Query 45770 GAAG-GGATACGCCGACACCCCCGTCACCAAATCCAAGGACGACTACACCCGTGCCCGAT 45828 | | || || |||||| || ||| ||| ||||| ||| ||| |||| | || | Sbjct 23392 GCCGTGGCTATGCCGACCTACCGGTCTTCAAGGACAAGGCCGAGTACTCCCGCCCGCGCT 23451 Query 45829 GGCAGGTGGACGCGCACG 45846 ||||| | || || |||| Sbjct 23452 GGCAGCTCGATGCCCACG 23469 Score = 113 bits (124), Expect = 2e-20 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 48922 CGGTGGCATCGACTGGGTGATCGTGGGCGGCGAATCCGGCCCCGGCGCGCGGCCGATGCA 48981 ||| ||||| ||||| | ||||| || ||||| ||| || |||||||| |||||||| Sbjct 5644 CGGCGGCATTCACTGGATCATCGTCGGAGGCGAGAGCGGGCCTGGCGCGCGTCCGATGCA 5585 Query 48982 CCCCGACTGGGCGCGCAGCCTGCGCGACCAATGCCAGGCGGCCGGTGTGCCGTTCCTGTT 49041 |||| |||||| ||| |||||||||||| ||| ||||||| | ||| |||| | || Sbjct 5584 CCCCAGCTGGGCCCGCGCCCTGCGCGACCAGTGCGCGGCGGCCAGCGTGGCGTTTCACTT 5525 Query 49042 CAAACAGTGGGG 49053 ||| |||||||| Sbjct 5524 CAAGCAGTGGGG 5513 Score = 93.3 bits (102), Expect = 2e-14 Identities = 202/296 (68%), Gaps = 10/296 (3%) Strand=Plus/Plus Query 44000 GGCGATCTTCGCGGCGTTCGGATTGGGCAAGACGGTGATGCAGTTGGAGATCGTGCGCCT 44059 |||| | ||| ||| ||||| ||||||||||| | |||| ||||||||||||| | Sbjct 21584 GGCGCTGTTCATGGCCTTCGGCCTGGGCAAGACGTTCGTGCAACTGGAGATCGTGCGGAT 21643 Query 44060 -GTCCCTGGCGAAGCACGGCGGCGGTAAAGGTCTGATCGTGATGCCGCTGGGGGTGCGGA 44118 |||| ||| || | ||| || | || |||||||| || || ||| ||| || Sbjct 21644 CGTCC---GCGC-GCGCATCGGTGGCATGGGCCTGATCGTCATCCCACTGTCGGTCCGCC 21699 Query 44119 TCGAGTTCGCCCACGACGCCAACATGCTGGGCATTGAAACCCGGTTCGTTCGCCGCACAG 44178 ||||||| | |||||| | ||||||||| | | |||| | ||| || | Sbjct 21700 AGGAGTTCGTGCGCGACGCGGCGAAGCTGGGCATCAAGGTCAAGTTCATCCGCACCATCG 21759 Query 44179 AAGAAGTCGGCGGCGACG---GTATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAA 44235 | || | | || | || | ||||| ||||||||||| ||| || || ||||| | Sbjct 21760 ACGAGGCTGACGACCCCGCGGGCATCTACCTCACCAACTACGAGTCGGTGCGGGACGGCA 21819 Query 44236 AGTTGGACCCGACACTGTTCACGGCCGTCTCACTCGACGAGGCGAGCGTG-CTGCG 44290 || ||||||||| ||||||| | | | || ||||||||| || || ||||| Sbjct 21820 AGCTGGACCCGATGCTGTTCAGCGTGGCCAGCCTGGACGAGGCG-GCTTGCCTGCG 21874 >seq109454 Length=55839 Score = 129 bits (142), Expect = 2e-25 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 48933 ACTGGGTGATCGTGGGCGGCGAATCCGGCCCCGGCGCGCGGCCGATGCACCCCGACTGGG 48992 ||||||||||| ||||||||| ||||| | |||||||||||||| ||||| ||||| Sbjct 47887 ACTGGGTGATCTGCGGCGGCGAAAGCGGCCACCACGCGCGGCCGATGCTCCCCGCCTGGG 47946 Query 48993 CGCGCAGCCTGCGCGACCAATGCCAGGCGGCCGGTGTGCCGTTCCTGTTCAAACAGTGGG 49052 | || |||||||||||| ||| |||| ||||| ||||||||||||||||| || |||| Sbjct 47947 CCCGAGACCTGCGCGACCAGTGCGAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAATGGG 48006 Query 49053 G 49053 | Sbjct 48007 G 48007 >seq69633 Length=120 Score = 107 bits (118), Expect = 7e-19 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 45419 CGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCAT 45478 ||| || |||| ||||||||||| ||||||||| | ||| | ||||| ||||||||||| Sbjct 120 CGATGATAACGAGCATTTCTGGGAGCAGATGGATTTCCTGATCCCGCAGCTGCTGCGCAT 61 Query 45479 CCTCGCGCCCGGGCGGATCTACGCCTGCCATGTCAAGGACCGCATCTTG 45527 || ||||||||||||||| ||| |||||| ||||| |||||| || Sbjct 60 TCTGGCGCCCGGGCGGATCGCGGCCATCCATGTGAAGGATCGCATCGTG 12 >seq36499 Length=515 Score = 100 bits (110), Expect = 1e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 48929 ATCGACTGGGTGATCGTGGGCGGCGAATCCGGCCCCGGCGCGCGGCCGATGCACCCCGAC 48988 || || ||||| |||| || |||||||||||| ||||| |||||||||||||| || Sbjct 264 ATTGATTGGGTCGTCGTCGGGGGCGAATCCGGCGATGGCGCACGGCCGATGCACCCAGAG 323 Query 48989 TGGGCGCGCAGCCTGCGCGACCAATGCCAGGCGGCCGGTGTGCCGTTCCTGTTCAAACAG 49048 ||||| || || ||||| |||||| ||| ||||| ||||| || || ||||| || Sbjct 324 TGGGCTCGATCACTCCGCGATCAATGCGCGGCTGCCGGCGTGCCATTTCTTTTCAAGCAA 383 Query 49049 TGGGG 49053 ||||| Sbjct 384 TGGGG 388 >seq81106 Length=13242 Score = 98.7 bits (108), Expect = 4e-16 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 48930 TCGACTGGGTGATCGTGGGCGGCGAATCCGGCCCCGGCGCGCGGCCGATGCACCCCGACT 48989 |||||||||| ||| |||||||| ||||||| ||||| ||||||||||| | | Sbjct 8759 TCGACTGGGTCATCTGTGGCGGCGAGAGCGGCCCCAAGGCGCGTCCGATGCACCCGGCAT 8818 Query 48990 GGGCGCGCAGCCTGCGCGACCAATGCCAGGCGGCCGGTGTGCCGTTCCTGTTCAAACAGT 49049 |||| || |||| ||||| || ||| ||| ||| ||||||||| ||||||| |||| Sbjct 8819 GGGCCCGAGGCCTCCGCGATCAGTGCGCGGCCGCCAAGGTGCCGTTCTTGTTCAAGCAGT 8878 Query 49050 GGGG 49053 |||| Sbjct 8879 GGGG 8882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192535817987414