Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026589.1 Length=55832 Score E Sequences producing significant alignments: (Bits) Value seq36499 125 3e-24 seq109454 116 1e-21 seq81106 95.1 4e-15 seq109371 89.7 2e-13 >seq36499 Length=515 Score = 125 bits (138), Expect = 3e-24 Identities = 106/128 (83%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 46460 GATTGGGTGATCGTCGGCGGCGAATCCGGCCCCGGCGCCCGGCCGATGCACCCCGACTGG 46519 |||||||| ||||||| |||||||||||| ||||| |||||||||||||| || ||| Sbjct 267 GATTGGGTCGTCGTCGGGGGCGAATCCGGCGATGGCGCACGGCCGATGCACCCAGAGTGG 326 Query 46520 GCGCGGTCGCTGCGCGATCAATGC-CGGATCGCCGGTGTGCCGTTCCTGTTCAAGCAGTG 46578 || || || || |||||||||||| ||| | ||||| ||||| || || |||||||| || Sbjct 327 GCTCGATCACTCCGCGATCAATGCGCGGCT-GCCGGCGTGCCATTTCTTTTCAAGCAATG 385 Query 46579 GGGTGAGT 46586 ||| |||| Sbjct 386 GGGCGAGT 393 >seq109454 Length=55839 Score = 116 bits (128), Expect = 1e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 46463 TGGGTGATCGTCGGCGGCGAATCCGGCCCCGGCGCCCGGCCGATGCACCCCGACTGGGCG 46522 ||||||||| |||||||||| ||||| | ||| |||||||||| ||||| |||||| Sbjct 47889 TGGGTGATCTGCGGCGGCGAAAGCGGCCACCACGCGCGGCCGATGCTCCCCGCCTGGGCC 47948 Query 46523 CGGTCGCTGCGCGATCAATGCCGGATCGCCGGTGTGCCGTTCCTGTTCAAGCAGTGGGGT 46582 || |||||||| || ||| | |||||| |||||||||||||||||||| ||||| Sbjct 47949 CGAGACCTGCGCGACCAGTGCGAGGCCGCCGGCGTGCCGTTCCTGTTCAAGCAATGGGGC 48008 Query 46583 GAGT 46586 |||| Sbjct 48009 GAGT 48012 >seq81106 Length=13242 Score = 95.1 bits (104), Expect = 4e-15 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 46457 CTCGATTGGGTGATCGTCGGCGGCGAATCCGGCCCCGGCGCCCGGCCGATGCACCCCGAC 46516 ||||| ||||| ||| |||||||| ||||||| || || ||||||||||| | Sbjct 8758 CTCGACTGGGTCATCTGTGGCGGCGAGAGCGGCCCCAAGGCGCGTCCGATGCACCCGGCA 8817 Query 46517 TGGGCGCGGTCGCTGCGCGATCAATGCCGGATCGCCGGTGTGCCGTTCCTGTTCAAGCAG 46576 ||||| || || |||||||| ||| | |||| ||||||||| ||||||||||| Sbjct 8818 TGGGCCCGAGGCCTCCGCGATCAGTGCGCGGCCGCCAAGGTGCCGTTCTTGTTCAAGCAG 8877 Query 46577 TGGGGTGAGT 46586 |||||||||| Sbjct 8878 TGGGGTGAGT 8887 >seq109371 Length=32687 Score = 89.7 bits (98), Expect = 2e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 46463 TGGGTGATCGTCGGCGGCGAATCCGGCCCCGGCGCCCGGCCGATGCACCCCGACTGGGCG 46522 ||| | |||||||| ||||| ||| || ||||| || |||||||||||| |||||| Sbjct 5631 TGGATCATCGTCGGAGGCGAGAGCGGGCCTGGCGCGCGTCCGATGCACCCCAGCTGGGCC 5572 Query 46523 CGGTCGCTGCGCGATCAATGCCGGATCGCCGGTGTGCCGTTCCTGTTCAAGCAGTGGGGT 46582 || | |||||||| || ||| | ||| | ||| |||| | |||||||||||||| Sbjct 5571 CGCGCCCTGCGCGACCAGTGCGCGGCGGCCAGCGTGGCGTTTCACTTCAAGCAGTGGGGC 5512 Query 46583 GAGT 46586 |||| Sbjct 5511 GAGT 5508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 178305034753428