Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026593.1 Length=59419 Score E Sequences producing significant alignments: (Bits) Value seq109371 167 9e-37 seq69633 86.0 2e-12 >seq109371 Length=32687 Score = 167 bits (184), Expect = 9e-37 Identities = 376/561 (67%), Gaps = 17/561 (3%) Strand=Plus/Plus Query 45406 CAACAACGACTGCGTACCCGAAACCGAGAGAATGGCAGACGATTCGGTGGATCTGATTGT 45465 |||| |||||||||| | || ||| | | ||||| ||| || | ||| | | Sbjct 22916 CAACGACGACTGCGTGCAGGAGACCCGGCGCATGGCGTCCGACAGCGTCGGCCTGGTCCT 22975 Query 45466 CACCAGTATTCCGTTCTCCAACCACTACGAATACACGCCGAGCTACAACGACTTCGGCCA 45525 ||||| || || ||| || || ||||| ||| |||||| || | ||||||||| || Sbjct 22976 GACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCGAACTTCGCCGACTTCGGGCA 23035 Query 45526 CACCGACGACAACGCCCATTTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCG 45585 |||||| ||||| || |||| ||||||||||||||| |||| | |||||||| Sbjct 23036 CACCGATAGCAACGAGCACTTCTTCCAGCAGATGGACTACCTGGTGCCGGAGCTGCTGCG 23095 Query 45586 CATCCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTGTT---CGG 45642 | | || ||| ||| | | || |||||||||| |||||||| || ||| Sbjct 23096 CGTGCTGATGCCAGGCAGGGTGGCGGCGATCCACGTCAAGAACCGCATCGTGCCGAGCGG 23155 Query 45643 AAACGTCACCGGCGCAGGCGTTCCCACCGTCTCCCCGTTCCACGCCGAGGCGAT------ 45696 | ||| |||| ||| | | |||| | ||||||| || || || | Sbjct 23156 CATGGTCGAGGGCGTTGGCTTCCAGACCGAGTACCCGTTCGACATGGACACGCTGGCCTG 23215 Query 45697 CTTTCACGGCCGCAAACACGGCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGT 45756 ||||| |||| ||||||||| ||||| ||||| | || | |||| || || Sbjct 23216 CTTTC---GCCGG---CACGGCTTCCACTACATCGGCCGCAAGCCCATCATCACGGACGT 23269 Query 45757 GGTGCGGGAAAACAACCAGACGTACCGGCTGGGCTGGTCGGAGCAGTGCAAAGACGCCAC 45816 ||| ||||| ||||||||||| ||| ||||||||||| ||||| ||||| |||| | Sbjct 23270 GGTCCGGGAGAACAACCAGACCTACAGGCTGGGCTGGAGCGAGCAATGCAAGGACGGTAG 23329 Query 45817 CAAGATGGGCGTTGGCTCCCCGGAATACGTTCTGCTGTTCCACAAACCGCAGACAGACAG 45876 | |||||| | ||| || ||| | ||||| |||| ||| ||| ||| ||| | Sbjct 23330 CCGCATGGGCTTCGGCCTGTGCGAGTACCTGCTGCTCTTCCGCAAGGCGCCGACCGAC-G 23388 Query 45877 GTCGAAG-GGATACGCCGACACCCCCGTCACCAAATCCAAGGACGACTACAGCCGTGCCC 45935 | | | || || |||||| || ||| ||| ||||| ||| ||| ||| | | Sbjct 23389 CTAGCCGTGGCTATGCCGACCTACCGGTCTTCAAGGACAAGGCCGAGTACTCCCGCCCGC 23448 Query 45936 GATGGCAGGTGGACGCGCACG 45956 | |||||| | || || |||| Sbjct 23449 GCTGGCAGCTCGATGCCCACG 23469 >seq69633 Length=120 Score = 86.0 bits (94), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 45529 CGACGACAACGCCCATTTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCAT 45588 ||| || |||| |||||||||| ||||||||| | ||| | ||||| ||||||||||| Sbjct 120 CGATGATAACGAGCATTTCTGGGAGCAGATGGATTTCCTGATCCCGCAGCTGCTGCGCAT 61 Query 45589 CCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGA 45643 || ||||| || || ||| ||| ||| || ||||| |||||| || |||| Sbjct 60 TCTGGCGCCCGGGCGGATCGCGGCCATCCATGTGAAGGATCGCATCGTGCCCGGA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189768277389922