Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq108672 136 1e-27 seq14176 105 2e-18 seq17923 87.8 6e-13 >seq108672 Length=10797 Score = 136 bits (150), Expect = 1e-27 Identities = 290/422 (69%), Gaps = 11/422 (3%) Strand=Plus/Plus Query 36711 CCTCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCACCACGGACTGCGCCTGCT 36770 ||| ||||| || |||||||| ||||||||||||||| | | || || | ||| Sbjct 3525 CCTGGGCCCGGCCGGCACCGGCAAGACCTTCCTGGCCGTGGCCTGCGCGGTGGACGCGCT 3584 Query 36771 GGAGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAA 36830 |||| | | | ||||| || || | || ||||| ||||| ||||||| || Sbjct 3585 GGAGCGCTCGACCGTGCAGCGCATCATCCTGACGCGCCCAGCCGTTGAGGCCGGCGAACG 3644 Query 36831 GCTCGGCTACCTGCCCGGCGGCATCGAAG-AGAAGATGGCTCCGTACCTGATCCCGATGC 36889 ||||||| ||||||||||| | | || | ||||| | | || || ||| |||| | Sbjct 3645 CCTCGGCTTCCTGCCCGGCGACCT-GACGCAGAAGGTCGACCCCTATCTGCGCCCGCTCT 3703 Query 36890 TGGACGCGGTGATCGACCTGGTTGGCC-CGACGATGGC--CAAGCGCCTGCAGGAGACCC 36946 ||||| | |||||| | ||| |||| | | |||| || | | |||| Sbjct 3704 ACGACGCCCTCTACGACCTTTTGGGCTTCGACCGCGTCACCAAG-GCGTTC--GAGAAGG 3760 Query 36947 GCCAGCTCGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTTCC 37006 ||||||||||| | || |||||||||| |||||| ||||| || | ||| || | ||| Sbjct 3761 GCCAGCTCGAGGTTGCGCCGCTGGCCTTCATGCGCGGCCGCACGCTGAACCACGCCTTCG 3820 Query 37007 TCATCGCCGACGAGATGCAGAACGCCAC-CCCGCGACAGGCCGCGCTGCTGGTGACCCGC 37065 ||||| ||||||| ||||||| | || |||| | ||| | || | |||||||| Sbjct 3821 TCATCCTCGACGAGGCGCAGAACACGACGCCCGAG-CAGATGAAGATGTTCCTGACCCGC 3879 Query 37066 CTGGGCTTCGGAACGCGGGCCGTCTTGAACGGTGACCCGGCCCAGTGCGACCTCCCG-GC 37124 ||||||||||| | || |||| | | ||| ||| | |||| |||||| ||| || Sbjct 3880 CTGGGCTTCGGCAGCCGCTGCGTCGTCACCGGCGACACCAGCCAGATCGACCTGCCGCGC 3939 Query 37125 GG 37126 || Sbjct 3940 GG 3941 >seq14176 Length=1367 Score = 105 bits (116), Expect = 2e-18 Identities = 256/384 (67%), Gaps = 8/384 (2%) Strand=Plus/Minus Query 4517 AAGGCCAAGCTCCTGATCGTGGACGAGTCGTCCATGGTCGACGAGTCGGTCGGTGAAGAC 4576 ||||| | ||| | || | ||||| | || ||||| |||||| |||| | ||| Sbjct 884 AAGGCGAGCCTCATCGTCATCGACGAATGCTCGATGGTGGACGAGGATCTCGGCAAGGAC 825 Query 4577 CTCCTGTCGTTCGGTGTGCCAATCCTCGCCCTGGGCGACCCCGCCCAGCTGCCGCCGGTG 4636 || ||||||||||| | | |||| || ||||| |||||||||||||||||||| Sbjct 824 CTGCTGTCGTTCGGCAAGAAGACGCTCGTGCTCGGCGATCCCGCCCAGCTGCCGCCGGTC 765 Query 4637 GCCGGGGCTGGATTCTTCACCAAGCAGAAGGCCGACTTCCTGCTGACCGACATCCACCGC 4696 || | || ||||||||| || || | ||| | ||||||| | | || ||| Sbjct 764 AAGGGTGGCGGCTTCTTCACCGAGGCCGAGCCGGACGTGATGCTGACGCAGGTGCATCGC 705 Query 4697 CAGGCCCGCGACAACCCCATCATTGAGATGTCGCGCATCG---TCCGCGAGGGTGGAACC 4753 |||||| |||||| || ||| | |||||| || | |||||||||| | | Sbjct 704 CAGGCCGCCGACAATCCGATCGTCCGCATGTCG---ATGGAAATCCGCGAGGGCCGCGCG 648 Query 4754 CTGAACCTGGGCCGCTACGGAGACAGCGAAGTCGTCCGGGGCGCTGACTTCCAGCGCGAC 4813 || || ||| ||| || || ||| ||| |||| || ||| || | ||| Sbjct 647 CTTGACTACGGCACCTATGGCGAGAGCCGCGTCATCCGTCGCAAGGACATCGACGCCGAG 588 Query 4814 TGGGTATTCCAGGCTGACCAGATTCTCGTCGGGAAAAACGACACCCGCCGAGC-CTACAA 4872 | || ||| | |||| |||||||| | ||| ||||| | ||| |||||| Sbjct 587 ACCATCCTCTCGGCCGGACAGACGCTCGTCGGCATGAACCGGACCCG-CAAGCTCTACAA 529 Query 4873 CGCTCGCATCCGCGAGCTGCGCGG 4896 | |||||||||||||||||||| Sbjct 528 CAACCGCATCCGCGAGCTGCGCGG 505 >seq17923 Length=176 Score = 87.8 bits (96), Expect = 6e-13 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 4607 CTGGGCGACCCCGCCCAGCTGCCGCCGGTGGCCGGGGCTGGATTCTTCACCAAGCAGAAG 4666 || ||||| |||| ||||||||||||||| | || | || | |||||||| ||| | Sbjct 4 CTTGGCGATCCCGGCCAGCTGCCGCCGGTCACGGGCGGCGGTTATTTCACCAATCAGGAT 63 Query 4667 GCCGACTTCCTGCTGACCGACATCCACCGCCAGGCCCGCGACAACCCCATCAT 4719 |||| | ||||||||| || ||||| |||||||| || ||||| || || || Sbjct 64 CCCGATTACCTGCTGACGGATATCCATCGCCAGGCGCGGGACAATCCGATTAT 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180558055678638