Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026597.1 Length=63334 Score E Sequences producing significant alignments: (Bits) Value seq109371 178 5e-40 seq69633 104 9e-18 >seq109371 Length=32687 Score = 178 bits (196), Expect = 5e-40 Identities = 381/564 (68%), Gaps = 23/564 (4%) Strand=Plus/Plus Query 47236 CAACAACGACTGCGTGCCCGAAACCGAGTCGATGGG---CGACAGCTCGGTAGATCTGAT 47292 |||| |||||||||||| || ||| | |||| ||||||| || | ||| | Sbjct 22916 CAACGACGACTGCGTGCAGGAGACCCGGCGCATGGCGTCCGACAGC---GTCGGCCTGGT 22972 Query 47293 TGTCACCAGCATTCCGTTCTCAAACCACTACGAGTACACGCCGAGCTACAACGACTTCGG 47352 | |||||||| || ||| | || ||||||||| |||||| || | ||||||||| Sbjct 22973 CCTGACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCGAACTTCGCCGACTTCGG 23032 Query 47353 CCACACCGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCT 47412 |||||||| ||||| ||| |||| ||||||||||||||| |||| | ||||| Sbjct 23033 GCACACCGATAGCAACGAGCACTTCTTCCAGCAGATGGACTACCTGGTGCCGGAGCTGCT 23092 Query 47413 GCGCATCCTCGCGCCCGGGCGGATCTACGCCTGCCACGTCAAGGACCGCATCTT---GTT 47469 |||| | || ||| || || | || |||||||||| |||||||| | | Sbjct 23093 GCGCGTGCTGATGCCAGGCAGGGTGGCGGCGATCCACGTCAAGAACCGCATCGTGCCGAG 23152 Query 47470 CGGAAACGTCACCGGCGCAGGCGTTCCCACCGTCTCCCCGTTCCACGCCGA------GGC 47523 ||| | ||| |||| ||| | | |||| | ||||||| || || ||| Sbjct 23153 CGGCATGGTCGAGGGCGTTGGCTTCCAGACCGAGTACCCGTTCGACATGGACACGCTGGC 23212 Query 47524 GATCTTTCACGGCCGCAAACACGGCTTCGACTACCTCGGCATGATCACCGTGGTCACCGA 47583 ||||| |||| ||||||||| ||||| ||||| | || | |||| || Sbjct 23213 CTGCTTTC---GCCG---GCACGGCTTCCACTACATCGGCCGCAAGCCCATCATCACGGA 23266 Query 47584 TGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCTGGTCGGAGCAGTGCAAAGACGC 47643 ||||| ||||| ||||||||||| ||| ||||||||||| ||||| ||||| |||| Sbjct 23267 CGTGGTCCGGGAGAACAACCAGACCTACAGGCTGGGCTGGAGCGAGCAATGCAAGGACGG 23326 Query 47644 CACCAAGATGGGCGTTGGCTCCCCGGAATACGTTCTGCTGTTCCACAAACCGCAGACAGA 47703 | | |||||| | ||| || ||| | ||||| |||| ||| ||| ||| || Sbjct 23327 TAGCCGCATGGGCTTCGGCCTGTGCGAGTACCTGCTGCTCTTCCGCAAGGCGCCGACCGA 23386 Query 47704 CAGGTCGAAG-GGATACGCCGACACCCCCGTCACCAAATCCAAGGACGACTACAGCCGTG 47762 | | | | | || || |||||| || ||| ||| ||||| ||| ||| ||| Sbjct 23387 C-GCTAGCCGTGGCTATGCCGACCTACCGGTCTTCAAGGACAAGGCCGAGTACTCCCGCC 23445 Query 47763 CCCGATGGCAGGTGGACGCGCACG 47786 | || |||||| | || || |||| Sbjct 23446 CGCGCTGGCAGCTCGATGCCCACG 23469 Score = 102 bits (112), Expect = 3e-17 Identities = 253/373 (68%), Gaps = 16/373 (4%) Strand=Plus/Plus Query 45866 CCGGGCGAGATTCACTCGATGTTGTTGCCGCACCAG--CGCGATCTGGTGCGTTGGGCGG 45923 |||| |||||| || || ||||| | ||||||| |||| | || ||||| Sbjct 21510 CCGGCCGAGATCAACCCGCTGTTGAAGTTGCACCAGATCGCGGCC--GTCATCTGGGCAA 21567 Query 45924 TC-GCCGGGGGTAGGCGCGCGATCTTCGCGGCGTTCGGCCTGGGCAAGACGGTGATGCAG 45982 || ||| || | ||| ||| | ||| ||| |||||||||||||||||| | |||| Sbjct 21568 TCCGCCTCGGCTGTGCG-GCGCTGTTCATGGCCTTCGGCCTGGGCAAGACGTTCGTGCAA 21626 Query 45983 CTGGAGATCGTGCGCCT-GTCGCTAGCCAAGCACGGCGGTGGGCGAGGCTTGATCGTGAT 46041 |||||||||||||| | ||| | || || | |||||| ||| ||||||| || Sbjct 21627 CTGGAGATCGTGCGGATCGTC-CGCGC---GCGCATCGGTGGCATGGGCCTGATCGTCAT 21682 Query 46042 GCCGCTGGGCGTGCGGATCGAGTTCGCCCACGACGCCAACATGCTGGGCATCGAAACCCG 46101 || ||| || || ||||||| | |||||| | |||||||||| | | Sbjct 21683 CCCACTGTCGGTCCGCCAGGAGTTCGTGCGCGACGCGGCGAAGCTGGGCATCAAGGTCAA 21742 Query 46102 GTTCGTTCGCCGCACAGAAGA---AGTCGGCGGCGATGGTATCTACCTCACCAACTACGA 46158 |||| | ||| || || || | || | || || |||||||||||||||||||| Sbjct 21743 GTTCATCCGCACCATCGACGAGGCTGACGACCCCGCGGGCATCTACCTCACCAACTACGA 21802 Query 46159 GAGCGTTCGCGATGGAAAGCTCGACCCGACACTGTTTACGGCCGTCTCACTCGACGAGGC 46218 | || || || || ||||| ||||||| ||||| | | | | || |||||||| Sbjct 21803 GTCGGTGCGGGACGGCAAGCTGGACCCGATGCTGTTCAGCGTGGCCAGCCTGGACGAGGC 21862 Query 46219 GAGCGTG-CTGCG 46230 | || || ||||| Sbjct 21863 G-GCTTGCCTGCG 21874 Score = 93.3 bits (102), Expect = 2e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 51589 CGGGATCGACTGGATCATCGTCGGCGGCGAGTCCGGACCCGGCGCTCGACCGATGCACCC 51648 ||| || |||||||||||||||| |||||| ||| || ||||| || ||||||||||| Sbjct 5641 CGGCATTCACTGGATCATCGTCGGAGGCGAGAGCGGGCCTGGCGCGCGTCCGATGCACCC 5582 Query 51649 CGACTGGGCGCGTGCTCTAAGGGACCAGAGGAACACGGTTGGTGCCGCGTTTCTGTTCAA 51708 | |||||| || || || | |||||| | ||| | | ||||||| ||||| Sbjct 5581 CAGCTGGGCCCGCGCCCTGCGCGACCAGTGCGCGGCGGCCAGCGTGGCGTTTCACTTCAA 5522 Query 51709 GCAGTGGGGTGAATGG 51724 ||||||||| || ||| Sbjct 5521 GCAGTGGGGCGAGTGG 5506 >seq69633 Length=120 Score = 104 bits (114), Expect = 9e-18 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 47359 CGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCAT 47418 ||| || |||| ||||||||||| ||||||||| | ||| | ||||| ||||||||||| Sbjct 120 CGATGATAACGAGCATTTCTGGGAGCAGATGGATTTCCTGATCCCGCAGCTGCTGCGCAT 61 Query 47419 CCTCGCGCCCGGGCGGATCTACGCCTGCCACGTCAAGGACCGCATCTTGTTCGGA 47473 || ||||||||||||||| ||| ||| || ||||| |||||| || |||| Sbjct 60 TCTGGCGCCCGGGCGGATCGCGGCCATCCATGTGAAGGATCGCATCGTGCCCGGA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 202269499775495