Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026606.1 Length=71200 Score E Sequences producing significant alignments: (Bits) Value seq109371 143 1e-29 >seq109371 Length=32687 Score = 143 bits (158), Expect = 1e-29 Identities = 218/305 (71%), Gaps = 8/305 (3%) Strand=Plus/Plus Query 58482 ATGAAAGCCGCCGGGGAATTGGACTGGAAGCTGCGCGAGGCCACCGGCATTGCCAAAGCC 58541 ||| | ||||| ||||| || ||| | | ||||| ||||||| ||||| |||||||| Sbjct 31816 ATGCAGGCCGCTGGGGAGTTCGACGCGCTGATGCGCCAGGCCACGGGCATCGCCAAAGCG 31875 Query 58542 CCTTATGTGGCTGAGTTTGTGCGGCTGCTGTTGGA-ATCGGA-AGAACGCATTGTGCTGT 58599 || || ||||| ||||| ||| ||||||| |||| | ||| |||| | | ||||||| Sbjct 31876 CCGTACGTGGCCGAGTTCGTGAAGCTGCTGCTGGACAGCGGCGAGAAGG--TCGTGCTGT 31933 Query 58600 TTGGTTGGCACCGGGCTGTGTACGACATTTGGGCGGACCTCTTGGCTGAGTTCAACCCCG 58659 | || ||||||||||| || ||||| || ||| | | ||||| | ||||| ||| Sbjct 31934 TCGGCTGGCACCGGGCGGTCTACGAGATCTGGCTGCGCGAATTGGCGGCCTTCAAGCCCC 31993 Query 58660 TGTTCTACACCGGCAGCGAGTCCAACACCCAAAAGGATGCCGCG--GCCGCTGCGTTCAT 58717 | | ||||| ||||||||||| | ||| || || | ||| || | ||| |||| Sbjct 31994 GGCTGTACACGGGCAGCGAGTCGTCGAACCAGAAAGACGAGGCGATGCAG--GCGCTCAT 32051 Query 58718 CCGTGGAGACTCCCGAATCCTGATCATGTCCCTACGTTCCGGCAGCGGCGTGGACGGGCT 58777 | || |||| || | | ||||||||||| || || || ||| || | || || || Sbjct 32052 CGAGGGCGACTGCCAACTGCTGATCATGTCGCTGCGCTCGGGCGCTGGTGCCGATGGCCT 32111 Query 58778 GCAGG 58782 ||||| Sbjct 32112 GCAGG 32116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 227406586199921