Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq110395 123 3e-23 seq69314 82.4 8e-11 >seq110395 Length=10286 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || ||||| ||||| || |||||||||||| | ||| | ||| |||||||| Sbjct 9958 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCGTCCTCGAGCTGC 9899 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| || || || | |||||| |||||||| || |||||||| || || || ||||| Sbjct 9898 TTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGGATGCCTTCCTTATCCTGGATTTTG 9839 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || ||| | || ||||||||||| || ||||| || || || || || || Sbjct 9838 GCCTTAACGTTGTCGATGGTATCGGACGATTCGACCTCGAGGGTGATCGTCTTCCCAGTA 9779 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || |||||||| || ||||| Sbjct 9778 AGCGTCTTAACGAAGATCTGCAT 9756 Score = 123 bits (136), Expect = 3e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 || || || || |||||||| || || ||||| ||| | ||| | ||| || | | Sbjct 10189 AGATGGAGGGTCGATTCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCTTCCAAC 10130 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || |||||||||||||||| |||||||| |||||||| |||||||| || || || || Sbjct 10129 TGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATC 10070 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| || | ||||||||||| || || ||||| || ||||| || || Sbjct 10069 TTAGCCTTGACGTTATCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTCCCA 10010 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || ||||| |||||||| Sbjct 10009 GTGAGCGTCTTGACGAATATTTGCAT 9984 >seq69314 Length=381 Score = 82.4 bits (90), Expect = 8e-11 Identities = 143/207 (69%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||| | ||||||| |||| || || ||| ||||| ||||| |||| | Sbjct 44 CAGCACATGTTTATGCGCGTATCGGTAGGTATCCACAAAGAAGATATTGAAAGCGCCATC 103 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 |||||||| | ||||| | |||||| ||||| | || || ||||| | Sbjct 104 AAAACGTACAACCTGATGAGCGAGCGCTGGTTTACACACGCAACCCCAACGTTGTTTAAC 163 Query 7684 GCGGGCAC---AAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGAC 7740 || ||||| ||| || ||| |||| || || |||||| | |||||| |||||| Sbjct 164 GCCGGCACTCCAAAA---CCACAAATGTCATCATGCTTTTTGTTGACCATGAAGGAAGAC 220 Query 7741 AGCATCGACGGCATTTACAACACGCTG 7767 ||||| || || |||||| |||| ||| Sbjct 221 AGCATTGATGGTATTTACGACACACTG 247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504695889906520