Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq107653 223 4e-53 >seq107653 Length=176415 Score = 223 bits (246), Expect = 4e-53 Identities = 492/724 (68%), Gaps = 38/724 (5%) Strand=Plus/Minus Query 104754 TGAGATGGGTTTCAGCATTGAGAAGGTTACTGTAACCGCCAAATCACGCGCCCTGAAGGC 104813 |||||||| |||||||| |||||||| || || || || || ||||| ||| || Sbjct 133146 TGAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGCCGCGCGCTGGCCGC 133087 Query 104814 TGAGTACAGTCTTGAGCTTGCTCAGGACCTCAAGGCAATTCATGGTTTGGATGCCGAGAC 104873 |||||| | || || || |||||||| |||||| | || ||| | || |||||| | Sbjct 133086 CGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGC 133027 Query 104874 CGAGCTGAGCAACATCCTCAGCACCGAGATCCTCGCTGAAATCAACCGTGAAGTTGTCCG 104933 ||||| ||||||||| |||||||||||| || || |||||||| || | || || Sbjct 133026 TGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCG 132967 Query 104934 TACCGTCTATGTAAACGCTG--TTGC-TGGTGCTCAGAACAACACCGCTTCTGCTGGTAT 104990 ||| ||| | | | | | || || | |||| | |||| | | || | Sbjct 132966 TACGGTC---CTGACCTCCGCCAAGCAGGGATCGCAGATCGACACGACCAACCCGGGCTT 132910 Query 104991 CTTTGACCTTGACGTTGACTCCAACGGCAGATGGTCTGTTGAGAAGTTCAAAGGACTTCT 105050 ||| ||||| ||||| ||||| |||||| | ||||| |||||||||||||| || || Sbjct 132909 CTTCGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTA 132850 Query 105051 GTTCCAGATTGAGCGTGA-TGCTAACGCTATCGGTCAGCAAACTCGTCGCGGGAAAGGCA 105109 ||||| || ||||| || ||| ||| |||| || | || | || || || || | Sbjct 132849 TTTCCACATCGAGCGCGAGTGC-AACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTA 132791 Query 105110 ACATCCTGATCTGCTCTGCAGACGTTGCTTCTGCCCTTGCGATGGCTGGTGTTCTTGACT 105169 |||||||||||||| | || ||||| || || || || || || | | || Sbjct 132790 ACATCCTGATCTGCACGGCGGACGTGGCATCGGCTCT---GAACGCCGCCG-GCT----- 132740 Query 105170 ACACCCCTGCA--CTGAAC---GGCAACAACGGTCTTATCCCTGATGACACCTCCAGCAC 105224 ||| || || | |||| || ||||| | || || ||||| || ||| Sbjct 132739 --ACCTCTCCATGCCGAACCTGGGTGACAACCTCCAGGTC---GACGACACGGGCAACAC 132685 Query 105225 CCTGGTTGGTACTCTGAACGGTCGCATTAAGGTCTACGTTGATCCTTACTCTGCTAACGT 105284 | | | |||| |||||||||||||| ||||||||| | || || ||| || | || Sbjct 132684 CTTCGCGGGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCCCTAC---GCGATCG- 132629 Query 105285 AAGTGACAAGCACTTCTATGTTGCTGGTTATAAGGGTTCTAGCGCC-TATGACGCTGGTC 105343 | | || || | | || || || |||||| | | |||| || ||||| || Sbjct 132628 --GCGGAAACTACATGTGCGT---AGGCTACAAGGGTCCGA-CGCCTTACGACGCCGGCA 132575 Query 105344 TCTTCTACTGCCCATATGTACCCCTCCAGCAGGTTCGTGCAATCAACCCTGACACCTTCC 105403 ||||||||||||| || || || ||||||||||||||||| | || | | |||| Sbjct 132574 TCTTCTACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAACTTCG 132515 Query 105404 AGCCCAAGATTGGCTTCAAGACTCGCTACGGCATGGTCTCCAATCCTTTCGCTCAAGGTC 105463 || || ||||||||||| ||||||||||||||| | || || ||||| || || | Sbjct 132514 GTCCTCGCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTCGCACAGGGAC 132455 Query 105464 TTAC 105467 | || Sbjct 132454 TGAC 132451 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 104377 TTTGACCCCGTTCTGATCTCCCTGATCAGGCGCTCCATGCCTCAACTGATCGCCTATGAC 104436 || ||||| | |||||| |||| |||||||||||||||| | ||||| ||||| ||| Sbjct 133490 TTCGACCCGATCCTGATCAACCTGGTCAGGCGCTCCATGCCGAACCTGATGGCCTACGAC 133431 Query 104437 ATCGCAGGCGTTCAACCGATGACTGGTCCTACTGGACTGATCTTCGCAATGCGTTCAAAC 104496 ||| || || || || ||||| ||||| || || ||||||||||| || || || | Sbjct 133430 ATCATGGGTGTGCAGCCCATGACCGGTCCGACCGGCCTGATCTTCGCCATCCGCTCGCGC 133371 Query 104497 TACGG 104501 ||||| Sbjct 133370 TACGG 133366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572227489477200