Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq107653 230 3e-55 seq93596 84.2 2e-11 >seq107653 Length=176415 Score = 230 bits (254), Expect = 3e-55 Identities = 483/706 (68%), Gaps = 23/706 (3%) Strand=Plus/Minus Query 110835 TGAGATGGGTTTCTCAATCGAGAAAGTCACCGTTACTGCAAAGGCACGCGCCCTGAAGGC 110894 |||||||| ||| |||||||| |||||||| || || ||| ||||| ||| || Sbjct 133146 TGAGATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGCCGCGCGCTGGCCGC 133087 Query 110895 CGAGTACAGCATCGAACTGGCTCAAGACCTTAAGGCGATTCATGGCTTGGATGCTGAGAC 110954 ||||||| || |||||||| || ||||| ||||| | || || | || || ||| | Sbjct 133086 CGAGTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGC 133027 Query 110955 CGAACTGGCTAACATCCTCAGCACTGAAATCCTTGCTGAAATCAACCGTGAAGTTGTTCG 111014 || || | ||||||||| ||| || ||||| || || |||||||| || | ||||| Sbjct 133026 TGAGCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCG 132967 Query 111015 TACCATCTACACAAACGCTGTTCCTGGTGCTCAGAACAATACCGCTAACGCTGGTATCTT 111074 ||| || || ||| | || | |||| | | || | ||| | || |||| Sbjct 132966 TACGGTCCTGACCTCCGCCAAGCAGGGATCGCAGATCGACACGACCAACCCGGGCTTCTT 132907 Query 111075 TGACCTTGACGTTGACTCCAACGGTCGTTGGTCTGTTGAGAAGTTCAAAGGACTTCTGTT 111134 ||||| ||||| ||||| ||||| || ||||| |||||||||||||| || || || Sbjct 132906 CGACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATTT 132847 Query 111135 CCAGATTGAGCGCGATTCTAACGCCATCGGTCAGCAAACTCGTCGTGGCAAGGGCAACAT 111194 ||| || |||||||| | ||| |||| || | || | ||||||||||| ||||| Sbjct 132846 CCACATCGAGCGCGAGTGCAACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTAACAT 132787 Query 111195 CCTGATTTGTTCTGCCGACGTTGCTTCTGCACTGGGTATGGCTGGTGTACTTGATTACAC 111254 |||||| || | || ||||| || || || ||| || || ||| | | || Sbjct 132786 CCTGATCTGCACGGCGGACGTGGCATCGGCTCTGAACGCCGCCGG-CTACCT--CTCCA- 132731 Query 111255 TCCTGCTCTTGCTGGTAACAATGCTCTCGCAGGCGTTGACGATACCTCCAGCACACTGGT 111314 | | | | || ||| |||| ||| ||| || ||||| || || ||| | | Sbjct 132730 TGCCGAACCTG--GGTGACAA-CCTC---CAG--GTCGACGACACGGGCAACACCTTCGC 132679 Query 111315 TGGTACACTCAATGGTAAGATTAAGGTCTACGTTGATCCTTACTCTGCAAACCTTGCTGA 111374 |||| || || ||| || ||||||||| | || || ||| || | | || || Sbjct 132678 GGGTATCCTGAACGGTCGCATCAAGGTCTACATCGACCCCTAC---GCGATC--GGCGGA 132624 Query 111375 CAAGCACTTCTATGTTGCTGGTTATAAGGGTACTAGCGCC-TATGACGCTGGTCTGTTCT 111433 || || | | || || || |||||| | | |||| || ||||| || | |||| Sbjct 132623 -AACTACATGTGCGT---AGGCTACAAGGGTCCGA-CGCCTTACGACGCCGGCATCTTCT 132569 Query 111434 ATTGCCCATATGTTCCTCTTCAGCAGGTTCGTGCAATCAACCCTGACACCTTCCAGCCCA 111493 | ||||| || |||||||| |||||||||||||| | || | | |||| || Sbjct 132568 ACTGCCCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAACTTCGGTCCTC 132509 Query 111494 AGATTGGCTTCAAGACTCGCTACGGCATGGTCTCGAACCCCTTCGC 111539 || ||||||||||| ||||||||||||||| ||||||||||||| Sbjct 132508 GCATCGGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTCGC 132463 >seq93596 Length=211 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 157440 TAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCAGGTTCGAGTCCTGC 157498 |||||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct 14 TAGCTCAGCTGGATAGAGCACCTGCCTTCTAAGCAGGTGGTCGCAGGTTCGAATCCTGC 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558726282446200