Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_027296.1 Length=53721 Score E Sequences producing significant alignments: (Bits) Value seq107209 113 2e-20 >seq107209 Length=46261 Score = 113 bits (124), Expect = 2e-20 Identities = 265/400 (66%), Gaps = 9/400 (2%) Strand=Plus/Plus Query 36319 CCCTGCTGGCAGATCCCACGGGACTCCATGCACATATGCCGGCATTTGAGCAAGACGCCG 36378 ||| || || ||| || ||| |||||||||||||| ||||| |||| | ||||| Sbjct 39398 CCCGGCGTGCGGATGCCGCGGCTTTCCATGCACATATGGCGGCACTTGATGACCACGCCA 39457 Query 36379 ACGCCGCGCGGTTTGAGCTCGGATTCGAAAAGCGCGTTGGCGATCTGCACCGTCAATCGT 36438 ||| | ||| | ||| | ||| | ||||||||||||||||| | ||||| ||| Sbjct 39458 ACGGCCTTCGGCTCAAGCAC---TTCCATCAGCGCGTTGGCGATCTGGATCGTCATGCGT 39514 Query 36439 TCCTGAACCTGGAGGCGTCGAGCGAACACGTTAGCCACTCGGCTGAGTTTCGAAAGCCCA 36498 ||||| ||||| ||||| ||||| || ||| ||| |||| || || || || Sbjct 39515 TCCTGTACCTGCAGGCGCTTGGCGAAGCAGTCGACCAGGCGGGTGAGCTTGGACAGGCCG 39574 Query 36499 AGAACGCGCCCATCCGGAATGTAAGCAATAGTCGCCGTGCCGAAGATGTCGGCAAGGTGA 36558 | | ||| | ||| | || | || || ||| ||||||||| || ||||| Sbjct 39575 ACGATTTTCCCGTTCGGCAGATAGCCGATGGTGGCCTTGCCGAAGAACGGCGCCAGGTGG 39634 Query 36559 TGCTCGCATTTCGAATAGATCGGAATGTCCTTGACCAAGACCATCTCG------TCATAG 36612 |||||||| | |||| |||||| | || | || || |||| || | | Sbjct 39635 TGCTCGCAATGGCTGTAGACGGGAATGCCGCGCACGACGATCAACTCGTTGTACTCCTCG 39694 Query 36613 GCACCTTCCTCGAAAGACTTCATGAAGTCGGCGGCATCCTGGGTGTAACCCTCGCCCCAT 36672 || || || ||||||| ||| | | ||| | | ||||||| ||| ||| | ||| Sbjct 39695 GCGCCGTCTTCGAAAGCCTTGAGCAGCTCGACCGGATCCTGGCCGTAGCCCGAGGTCCAG 39754 Query 36673 TTTTCCCACGCCTTGGCGAACCGTTCGGGGGTGTCGAGCA 36712 | | |||||||||||| | || | || || ||| ||| Sbjct 39755 TGCTTCCACGCCTTGGCCACGCGCGCCGGCGTTTCGTGCA 39794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171558755075246