Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq107811 131 8e-26 seq15205 120 1e-22 seq67108 111 7e-20 seq13662 96.9 2e-15 seq78619 91.5 7e-14 seq105722 84.2 1e-11 >seq107811 Length=6275 Score = 131 bits (144), Expect = 8e-26 Identities = 132/174 (76%), Gaps = 16/174 (9%) Strand=Plus/Minus Query 21955 TGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAGC 22014 ||| | || || ||||||||||| ||||| ||||| |||||||| ||||| |||||| Sbjct 4403 TGCCAGCTGTACCAGCGCAGCGCCGACATCTTCCTCGGCGTGCCGTTCAATATCGCCTCG 4344 Query 22015 TACGCGCTGCTGACGCACCTCATGGCGGCCACGGTCGGCATGCAGGCCGAGA-------- 22066 |||||||||||||||||| | |||||| | ||| ||||| | || Sbjct 4343 TACGCGCTGCTGACGCACATGATGGCG--------CAGCAGGCAGGTCTCGACGTGGGCG 4292 Query 22067 AGTTCATCTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGG 22120 | ||| ||||| | ||||||||||||||||| || |||||||||||||| |||| Sbjct 4291 ACTTCGTCTGGACCGGCGGTGACTGCCACCTCTATTCGAACCACATGGAGCAGG 4238 >seq15205 Length=1481 Score = 120 bits (132), Expect = 1e-22 Identities = 130/169 (77%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 21954 CTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAG 22013 |||| | ||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct 1479 CTGCCAGCTCTACCAGCGCAGCGCCGACATCTTCCTGGGCGTGCCTTTCAACATCGCCAG 1420 Query 22014 CTACGCGCTGCTGACGCACCTCATGGCGGCCA-CGGT-CGGCATGCAGGCCGAGAAGTTC 22071 ||| ||||||||||| | |||| ||| | || || | |||| || | ||| Sbjct 1419 CTATGCGCTGCTGACAATGATGCTGGC--CCAGCAGTGCGACCTGCAACTCGGCGACTTC 1362 Query 22072 ATCTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGG 22120 |||||| | ||||| ||||| ||| | ||| |||||| |||| |||| Sbjct 1361 ATCTGGACGGGCGGCGACTGTCACATCTACGACAACCACGTGGAGCAGG 1313 >seq67108 Length=1010 Score = 111 bits (122), Expect = 7e-20 Identities = 124/163 (76%), Gaps = 6/163 (4%) Strand=Plus/Plus Query 21961 CTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAGCTACGCG 22020 || || ||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||| Sbjct 2 CTGTACCAGCGCAGCGCCGACATCTTCCTAGGCGTGCCCTTCAACATCGCCAGCTATGCG 61 Query 22021 CTGCTGACGCACCTCATGGCGGCCACGGTCGGCATGCAGGCCGAG---AAGTTCATCTGG 22077 |||| |||||| | |||| || | || | | ||||| | | ||||||||| Sbjct 62 TTGCTCACGCACATGGTGGC-GCAGCAGT--GTGACCTGGCCGTGGGTGACTTCATCTGG 118 Query 22078 TCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGG 22120 | ||||| || ||||| | ||| |||||| ||||||||| Sbjct 119 ACAGGCGGCGATTGCCATATCTACAGCAACCACGTGGACCAGG 161 >seq13662 Length=10689 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/186 (74%), Gaps = 15/186 (8%) Strand=Plus/Minus Query 21955 TGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAGC 22014 ||| | |||||||||||| || || ||||||||||||| |||||||||||||||||| Sbjct 10682 TGCCAGCTCTATCAGCGCTCGGCGGATGTGTTCCTGGGCGTTCCCTTCAACATCGCCAGC 10623 Query 22015 TACGCGCTGCTGACGCACCTCATGGC---GGCCACGGTCGGC--ATGCAGGCCGAG-AAG 22068 || |||||||||||| | ||||| ||| |||| ||| | || || |||| | Sbjct 10622 TATGCGCTGCTGACGATGATGATGGCGCAGGCGACGG--GGCTGAAGCCGGGCGAGTTCG 10565 Query 22069 TTCATCTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGGCCAA---G 22125 | ||| | || |||| | || ||| || || ||||||||| | || |||||| | | Sbjct 10564 TGCATTCGCTC-GGCGAT-AC--CCATCTCTATTCGAACCACTTCGAGCAGGCCGAATTG 10509 Query 22126 CAGCTG 22131 |||||| Sbjct 10508 CAGCTG 10503 >seq78619 Length=107 Score = 91.5 bits (100), Expect = 7e-14 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 21719 ACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAACGTGGCCGAGCTCGACCAGATGG 21778 |||| |||||||||||||||||||| | ||||||||||||||||| || ||||||| Sbjct 11 ACCCCGACAGCCGCCGCATCATCGTCAGCGCCTGGAACGTGGCCGACCTGCCGCAGATGG 70 Query 21779 CCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21811 | ||| || ||||| ||| | |||||||||| Sbjct 71 CGTTGATGCCCTGCCACGCGTTCTTCCAGTTCT 103 >seq105722 Length=466 Score = 84.2 bits (92), Expect = 1e-11 Identities = 260/391 (66%), Gaps = 16/391 (4%) Strand=Plus/Minus Query 21412 GACCGCACTGGCACAGGCACCAAGTC--CGTATTCGGTGCCCAGATGGAATTCGATCTGC 21469 || ||||| ||||| ||||| | || ||| ||||| |||||| ||||| ||| Sbjct 389 GATCGCACGGGCACGGGCAC--ACTCGGCGTGTTCGGCCGCCAGATCCGCTTCGACCTGG 332 Query 21470 GTGAGGGCTTCCCCCTGCT--CCAG-AAGAAGACCACCCCCTTCACCACGATCTTCACCG 21526 ||||||| || | || ||| |||||| | | ||| | | ||||||||| || Sbjct 331 CCAAGGGCTTTCCGGTCCTGACCACCAAGAAG--CTGCACCTGCGCT-CGATCTTCATCG 275 Query 21527 AGCTCTCGTGGATGATGCAGGGCCTGACCAATGTGAACTGGCTACAG--CAAAAGGGCTG 21584 |||| |||| | || ||||| ||||| || || || ||| ||| | || Sbjct 274 AGCTGCTGTGGTTCCTGAAGGGCGACACCAACGTCCGCTATCTGCAGGACAACAAGGT-- 217 Query 21585 CCACATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGGTGCCCA 21644 || |||||||||||| ||||| | | |||| ||| || || |||| || || Sbjct 216 CCGCATCTGGGACGAGTGGGCCGACGAAAACGGCGACCTGGGTCCCGTCTACGGCAAGCA 157 Query 21645 GTGGCGCAGCATCCAAGGCCCCGAT-GGAAAGAACATCGACCAGCTGGCCAAGGCACAAG 21703 |||||| | | |||||||| || || ||||||||| | ||||| | Sbjct 156 ATGGCGCT-CGTGGGCGGCCCCGAACGGCCAGTCGATCGACCAGATCGCCAACCTCGTCG 98 Query 21704 AGCTGCTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAACGTGGCCG 21763 || ||| || | |||| ||||||||||| |||||| ||||||||| ||||| Sbjct 97 AGAACCTGAAGACCAACCCCAACAGCCGCCGCCACATCGTCTCGGCCTGGAACCCGGCCG 38 Query 21764 AGCTCGACCAGATGGCCCTGACACCGTGCCA 21794 | ||||| | ||||||||| | || ||||| Sbjct 37 ATGTCGACGACATGGCCCTGCCGCCCTGCCA 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236322486419111