Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq107811 134 2e-26 seq71830 120 5e-22 seq67108 98.7 2e-15 seq26113 86.0 1e-11 seq15205 86.0 1e-11 >seq107811 Length=6275 Score = 134 bits (148), Expect = 2e-26 Identities = 205/292 (70%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 198329 CTTTCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATC 198388 || || || ||||| || || ||||| || || | |||||||||||||||||||| ||| Sbjct 4409 CTCTCGTGCCAGCTGTACCAGCGCAGCGCCGACATCTTCCTCGGCGTGCCGTTCAATATC 4350 Query 198389 GCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGAT 198448 || || ||||| | || ||||||| | || ||||||| | | |||||| Sbjct 4349 GCCTCGTACGCGCTGCTGACGCACATGATGGCGCAGCAGGCAGGTCTCGACGTGGGCGAC 4290 Query 198449 TTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCTC 198508 ||| | ||||| ||||||||| || ||||| || || || ||||||||| | | Sbjct 4289 TTCGTCTGGACCGGCGGTGACTGCCACCTCTATTCGAACCACATGGAGCAGGTCGACGAA 4230 Query 198509 CAGCTGACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCGTAAACCGGAATCT 198568 ||||| |||| | ||| | || | || || || |||||||||| || ||||| | Sbjct 4229 CAGCTCGCGCGCGCCCCGCTGCCGCTGCCCAAGCTCGTCATCAAGCGCAAGCCGGACACG 4170 Query 198569 ATCTTCGATTATAAATTCGAAGATTTTGAGATCGTTGGGTATCAGTCTCATG 198620 | ||||| || | ||||| || || |||||||| || || ||| |||| Sbjct 4169 CTGTTCGACTACACCTTCGACGACTTCGAGATCGTCGGCTACGCGTCGCATG 4118 Score = 113 bits (124), Expect = 7e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 197660 GTTAAAGGCGATCGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTT 197719 |||||| ||| || || || || || ||| | || || || || | ||||||||| || Sbjct 4835 GTTAAAACCGACCGCACGGGCACCGGCACGGTCTCCGTGTTCGGCCACCAGATGCGCTTC 4776 Query 197720 GATTTGCGTAAAGGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATC 197779 |||||| | ||||| ||| | || ||||| ||||| || || ||| || || ||| Sbjct 4775 AATTTGCAGGATGGTTTTCCGCTCGTGACGACCAAGAAGCTGCATCTGAAGTCGATCATC 4716 Query 197780 CATGAACTGCTGTGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGC 197839 ||||||||| | |||||||| ||| ||||||| | |||||| | || |||||| Sbjct 4715 CATGAACTGATCTGGTTCCTGGCGGGGTCCACCAACATCGGCTATCTGAAGGAAAACGGC 4656 Query 197840 GTTACCATTTGGCGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCC 197886 || | || ||| |||||| |||||||| || |||| || || Sbjct 4655 GTCAAGATCTGGGACGAGTGGGCCGATGAAAACGGCGACCTCGGTCC 4609 >seq71830 Length=566 Score = 120 bits (132), Expect = 5e-22 Identities = 200/287 (70%), Gaps = 8/287 (3%) Strand=Plus/Plus Query 197613 TGAAACAATATCTTGAGATGATGCAGAACATTCTGGA---CGAGGGTCATGTTAAAGG-C 197668 ||||||||||||| || |||||| || | ||||| || | || |||| | Sbjct 166 TGAAACAATATCTCGACCTGATGCGCCACGTACTGGAAACCGGCGCCCA----AAAGCAC 221 Query 197669 GATCGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCGT 197728 || ||||| || || || || || ||| ||||| ||| ||||||||| |||| Sbjct 222 GACCGTACCGGCACCGGCACCATTAGTGTGTTTGGCTACCAAATGCGTTTTAATTTAAAA 281 Query 197729 AAAGGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTG 197788 | ||||||||| | || ||||| || || || ||| || || || ||||| || || Sbjct 282 GACGGTTTCCCGCTGGTGACGACCAAAAAGCTGCACTTGAAATCGATCATCCACGAGTTG 341 Query 197789 CTGTGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATT 197848 | ||||| | || || |||||||| | |||||| || ||||||||||||| | ||| Sbjct 342 ATCTGGTTTTTGAGCGGTGATACCAATATCAAATACCTAAAAGATAACGGCGTAAAAATT 401 Query 197849 TGGCGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCCCCTGTATGG 197895 ||| |||||| |||| |||| ||||| || || ||||||| Sbjct 402 TGGGACGAGTGGGCCGATGCCGATGGCAACCTCGGGCCGGTGTATGG 448 >seq67108 Length=1010 Score = 98.7 bits (108), Expect = 2e-15 Identities = 177/259 (68%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 198340 GCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATCGCGTCTTACGC 198399 ||| || || ||||| || || | ||||| |||||||| ||||||||||| || || Sbjct 1 GCTGTACCAGCGCAGCGCCGACATCTTCCTAGGCGTGCCCTTCAACATCGCCAGCTATGC 60 Query 198400 ATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGATTTCATTTGGAC 198459 || ||| ||||||||| || |||||| | || ||| ||| || ||||| ||||| Sbjct 61 GTTGCTCACGCACATGGTGGCGCAGCAGTGTGACCTGGCCGTGGGTGACTTCATCTGGAC 120 Query 198460 GGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCTCCAGCTGACGCG 198519 ||||| || ||| ||||| || || |||| |||| || || |||| || Sbjct 121 AGGCGGCGATTGCCATATCTACAGCAACCACGTGGACCAGGTGAACGAACAACTGAGCCG 180 Query 198520 TGAGCCGTTACCTTTACCGAAACTGATCATCAAGCGTAAACCGGAATCTATCTTCGATTA 198579 | ||| | || | |||| ||| ||||||||| || |||| ||||||| || Sbjct 181 CGCGCCCTACCCCTACCCGACTCTGCACATCAAGCGCAAGCCGGCCGATATCTTCAGCTA 240 Query 198580 TAAATTCGAAGATTTTGAG 198598 | || || ||||| ||| Sbjct 241 CGAGTTTGAGGATTTCGAG 259 >seq26113 Length=815 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 197668 CGATCGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCG 197727 ||| || || || || || |||| || ||||| | ||||||||| || || || Sbjct 328 CGACCGCACCGGCACCGGCACGCGCAGCGTGTTTGGCCACCAGATGCGCTTCGACCTGAA 269 Query 197728 TAAAGGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACT 197787 |||| || ||| ||||||| || ||||| | |||||||| || || ||||| ||||| Sbjct 268 CGAAGGCTTTCCGCTAGTCACCACCAAGAAGGTGCACCTGCGCTCCATCATCCAGGAACT 209 Query 197788 GCTGTGGTTCCT 197799 |||||||||||| Sbjct 208 GCTGTGGTTCCT 197 >seq15205 Length=1481 Score = 86.0 bits (94), Expect = 1e-11 Identities = 179/267 (67%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 198332 TCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATCGCG 198391 || || |||||||| || ||||| || || | ||||| |||||||| ||||||||||| Sbjct 1481 TCCTGCCAGCTCTACCAGCGCAGCGCCGACATCTTCCTGGGCGTGCCTTTCAACATCGCC 1422 Query 198392 TCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGATTTC 198451 || || | || ||| | ||||||||| || || | ||||| ||| Sbjct 1421 AGCTATGCGCTGCTGACAATGATGCTGGCCCAGCAGTGCGACCTGCAACTCGGCGACTTC 1362 Query 198452 ATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCTCCAG 198511 || ||||||||||| ||| || ||||| || || ||||||||| || |||| Sbjct 1361 ATCTGGACGGGCGGCGACTGTCACATCTACGACAACCACGTGGAGCAGGTGCAGACCCAG 1302 Query 198512 CTGACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCGTAAACCGGAATCTATC 198571 || | || ||||| ||| | |||| || | ||||| || |||| || ||| Sbjct 1301 CTCGCCCGCGAGCCACGACCCTACCCGACCATGCTGATCAAACGCCGGCCGGCGTCGATC 1242 Query 198572 TTCGATTATAAATTCGAAGATTTTGAG 198598 ||||| || | | ||| || || ||| Sbjct 1241 TTCGACTACGAGTACGAGGACTTCGAG 1215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 768124411281080