Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq107681 233 2e-56 seq58313 134 1e-26 >seq107681 Length=5071 Score = 233 bits (258), Expect = 2e-56 Identities = 581/869 (67%), Gaps = 20/869 (2%) Strand=Plus/Plus Query 43710 TTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGA 43769 |||| || |||| | || || ||| | ||||| |||||| | | || ||||||| Sbjct 3650 TTCCTATAAAATACCCTGCTATTTGGGAGATGTATAAAAAATCGGAAGCCAGCTTTTGGA 3709 Query 43770 CAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAAG 43829 |||| |||||| |||| || | | ||| | ||||||| || | || || | Sbjct 3710 CAGCCGAAGAAATTGACCTGTCGGACGACCTGAAACATTGGGAAGCCATGAACCCGGGCG 3769 Query 43830 AAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATG 43889 | |||||||| || || | |||| |||||||| || ||||| || || || || | Sbjct 3770 AGAAACATTTCATTTCGCACATCCTGGCTTTTTTTGCCGCCAGCGATGGTATTGTGAACG 3829 Query 43890 AAAATTTGGTTAGTCGGTT--TGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTA 43947 |||| | | | || || || || || |||||||| ||||| || || ||||| Sbjct 3830 AAAACCTTGCTGTGAACTTCATGAGCGAG--GTGCAATTACCCGAAGCCCGTTGCTTTTA 3887 Query 43948 TGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATAC 44007 || ||||| || || || || || || || || | ||| || ||||||||||| Sbjct 3888 CGGTTTTCAGATCATGATGGAGAACATCCACTCAGAGACCTACGCGCTACTGATAGATAC 3947 Query 44008 GTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACC-TG 44066 ||||| ||||| | || || |||| ||||| | ||| | || || | || || Sbjct 3948 TTACATTAAAGACCCGGTTGAAAAAGATCGTTTGTTCCACGCGGTTGATACGATTCCATG 4007 Query 44067 CGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGAG 44126 | ||| | || ||||| ||||| || ||||| || || | | |||| | Sbjct 4008 TGTGCAAA-AGAAGGCAGAGTGGGCGCTGCGCTGGATCAAC---AACGGCACCTTTGCCG 4063 Query 44127 AACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGG-ATCGTTTGCGGCC 44185 | || | || || ||||| | ||| |||||||||||||||||||| | | | || | Sbjct 4064 AGCGTTTGGTAGCATTTGCGGCTGTTGAAGGCATTTTCTTTTCAGGGAGCTTCTGTT-CT 4122 Query 44186 ATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATA 44245 || || |||||||| ||||| || ||||||| || ||||| ||| || || | ||| Sbjct 4123 ATCTTCTGGTTAAAAAAACGTGGCCTGATGCCCGGATTGACCTTTAGTAACGAACTGATA 4182 Query 44246 AGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG--TTACTTGGATATCTAGGAG 44303 || |||||||| | ||| ||||| ||||| ||| || |||| | ||| |||| Sbjct 4183 TCGCGCGATGAAGGTTCACACTGCGAATTTGCCTGCCTGCTTTAC---GGTATGCTGGAG 4239 Query 44304 ACGATAAGCCTT-CATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAA 44362 | |||| | || ||| || |||| | ||| || || || ||| |||| ||| Sbjct 4240 A--ATAAACTGAGCACAGAAG-CAGTTACCAAAATTATTACCGACGCGGTAGAGATTGAA 4296 Query 44363 CAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACTTTTGATG 44422 |||||||||| || ||||| || ||| |||||||| ||||| | |||||| Sbjct 4297 AAAGAATTTATTACCGACGCATTGCCGGTATCGTTAATAGGGATGAACGCTAAATTGATG 4356 Query 44423 AACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACAC 44482 | |||||| ||||| | | || || |||| | |||||||||| |||| Sbjct 4357 AGCCAATACATTGAGTTTGTGGCTGACCGTTGGTTAGGCGAACTGGGTTATCCTAAAGTG 4416 Query 44483 TATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAAC 44542 || | | |||||||||||||||||||| | || || | |||||||||| || Sbjct 4417 TACGGCGCATCTAACCCGTTTGATTTTATGGAGATGATATCCCTACAAGGCAAAACCAAT 4476 Query 44543 TTTTTTGAAAAACGCGTTGGAGAATATCA 44571 || ||||||||| | || ||||| || || Sbjct 4477 TTCTTTGAAAAAAGGGTAGGAGATTACCA 4505 >seq58313 Length=1260 Score = 134 bits (148), Expect = 1e-26 Identities = 424/637 (67%), Gaps = 30/637 (5%) Strand=Plus/Plus Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGG 44023 || || ||||| || ||||||| ||| | | |||| || || ||| | ||||| | Sbjct 14 ATGGAGAATATCCACTCGGAAACCTACGCTTTGTTGATCGACACTTACGTAAAAGACCCG 73 Query 44024 CACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGC 44082 ||| ||| |||| ||||| | || || || || |||| || | | | | ||||| Sbjct 74 GCCGAAAAGGATCGGTTGTTCCACGCTATCGACACCATACCATGTGTGCAGA-AGAAAGC 132 Query 44083 AGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTT 44142 || ||||| || ||||| || ||| | |||| | || || | || || || Sbjct 133 CGAATGGGCGCTGCGCTGGATCAA--CAACGGCAACTTT-GCCGAGCGTTTGGTGGCATT 189 Query 44143 TGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCC-ATATTTTGGTTAAAGA 44201 ||| | || |||||||| |||||||| || | |||| | | || || ||| | || | Sbjct 190 TGCTGCGGTTGAAGGCATCTTCTTTTCGGG-TAGTTTCTGCTCTATCTTCTGGCTGAAAA 248 Query 44202 AACGAGGTTTGATGCCTGGGTTGACGTTTTCA--AATGAGTTAATAAGTCGTGATGAAGG 44259 |||| || |||||||| ||| |||| ||||| || ||| | ||| || |||||||| Sbjct 249 AACGCGGATTGATGCCAGGGCTGAC--TTTCAGTAACGAGCTGATATCGCGCGATGAAGG 306 Query 44260 CTTACATTGCGATTTTGCTTGCTTGTT--ACTTGGATATCTAGGAGACGATAAGCCTTCA 44317 | || ||||| ||||| ||| || | || | || || | | || |||| Sbjct 307 TTCGCACTGCGAATTTGCCTGCCTGCTGTACA-GCATG-CTGGAAAAC---AAGCTGAGC 361 Query 44318 TGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGA-C 44376 | || | | || | ||| || ||| || ||| |||||||| | |||||||| | | Sbjct 362 ACTGAGGCGGTCACCAAAATTATTAAAGACGCGGTAGAGATAGAAAAGGAATTTATCAGC 421 Query 44377 AACAGCATTACCTGTAAATTTAATAGGAATGAATG---AACTTTTGATGAACCAATATAT 44433 || || | || ||| |||||||| ||||| | |||| ||||| || ||||| Sbjct 422 GAC-GCGCTGCCGGTATCGTTAATAGGTATGAACGCCAAACT---GATGAGTCAGTATAT 477 Query 44434 TGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTGTACA 44493 ||| | | || || | | || |||||||| | ||| |||| || || Sbjct 478 TGAGTTTGTAGCCGACAGATGGCTGGGCGAACTGGGCTATCCGAAAG--TATACGGTGCA 535 Query 44494 --AAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAA 44551 ||| ||||||||||||||||| | || ||| | | |||||||| ||||||||||| Sbjct 536 TCAAATCCGTTTGATTTTATGGAGATGATATCGCTACAGGGCAAAACCAACTTTTTTGAG 595 Query 44552 AAACGCGTTGGAGAATATCAGCGAATGGGCGTCATGA 44588 |||||||| || || || || || ||||| |||| Sbjct 596 AAACGCGTGGGCGATTACCAAAAAAGCGGCGTAATGA 632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396917342912005