Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq111055 116 3e-21 seq110621 104 2e-17 >seq111055 Length=9949 Score = 116 bits (128), Expect = 3e-21 Identities = 185/260 (71%), Gaps = 4/260 (2%) Strand=Plus/Minus Query 58077 GCACGCTACAGCTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAA-CCCGGCA 58135 || |||| |||||||| || ||||||| || || || ||||| ||||| ||||||| Sbjct 6785 GCTCGCTGCAGCTGATCCGCGATAACGGCTGCAAGGCCGGCCTGGTGTTCAATCCCGGCA 6726 Query 58136 ACGCCGCTCAGTTATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCC 58195 ||||||| || ||||| ||||| |||||||| | || | ||||| | ||||| Sbjct 6725 -CGCCGCTGCACTACCTCGACTACGTGATGGACAAGATCGACATCATCCTCATCATGTCG 6667 Query 58196 GTGAACCCAGGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGA- 58254 || ||||| ||||||||||||||||| || ||| | || |||| | || | ||| | Sbjct 6666 GTCAACCCCGGCTTCGGCGGCCAGTCCTTCATTGCCGAGGCGCTCAAGAAGAT-CGCCAT 6608 Query 58255 AGTGCGTCGCCGCATTGATGCGTCCGGTTACGACATTCGCCTGGAAGTGGACGGCGGCGT 58314 | ||| ||| || || | ||| || |||||| || ||||| ||||| || | Sbjct 6607 CGCGCGCCGCATGATCGACGAGTCGGGCCGCGACATCATGCTCGAAGTCGACGGTGGTAT 6548 Query 58315 GAAGGTGAACAATATCGGCG 58334 || || ||||||||| || Sbjct 6547 CAAAGTCGACAATATCGCCG 6528 >seq110621 Length=1880 Score = 104 bits (114), Expect = 2e-17 Identities = 167/236 (71%), Gaps = 12/236 (5%) Strand=Plus/Minus Query 58112 GCGGGGCTGGTATTCAACCCGGCAACGCCGCTCAGTTATCTCGATTACGTCATGGACAAA 58171 || || || || |||||||| | |||||||| | || || | ||||| ||||| Sbjct 967 GCAGGCCTCGTCTTCAACCCCGGCACGCCGCTGGATGTGCTGGAGTGGGTCATCGACAAG 908 Query 58172 CTGGATGTGATCCTGCTGATGTCCGTGAACCCAGGCTTCGGCGGCCAGTCTTTTATTCCG 58231 | || || | ||||||||| ||| ||||| ||||||||||||||| || || ||| Sbjct 907 GTCGACATGGTGCTGCTGATGAGCGTCAACCCCGGCTTCGGCGGCCAGAGCTTCATCCCG 848 Query 58232 CAGACGCTGGATAAACTGCGCGAAG---TGCG---TCGCCGCATTGATGCGTCCGGTTAC 58285 | ||||| | || |||| |||| ||| || ||| || ||| ||| | Sbjct 847 ACGGCGCTGAAGAAGCTGC-AGAAGGCCCGCGAGATCATCGCCAAGA-GCGGCCG----C 794 Query 58286 GACATTCGCCTGGAAGTGGACGGCGGCGTGAAGGTGAACAATATCGGCGAGATCGC 58341 ||||| || ||||| | ||||||||||||||||| |||| ||| |||||||||| Sbjct 793 GACATCCGGCTGGAGATCGACGGCGGCGTGAAGGTCGACAACATCCGCGAGATCGC 738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470586568285480